RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 THG1LQ9NWX6 298 aaKnown RBP17.67■□□□□ 0.42
CCDC38-203ENST00000546803 PTPRDP23468 1912 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 COCHO43405 550 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 GABBR2O75899 941 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 LSM8O95777 96 aaKnown RBP17.66■□□□□ 0.42
CCDC38-203ENST00000546803 LCP1P13796 627 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 FERP16591 822 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 PGFP49763 221 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 DAOAP59103 153 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 SIGLEC14Q08ET2 396 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 FCHO2Q0JRZ9 810 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 PDCLQ13371 301 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 TMEM110Q86TL2 294 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 DDX42Q86XP3 938 aaKnown RBP eCLIP17.66■□□□□ 0.42
CCDC38-203ENST00000546803 GPIHBP1Q8IV16 184 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 BAP1Q92560 729 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 XPO4Q9C0E2 1151 aaKnown RBP17.66■□□□□ 0.42
CCDC38-203ENST00000546803 TTYH3Q9C0H2 523 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 NACA2Q9H009 215 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 SMG9Q9H0W8 520 aaKnown RBP17.66■□□□□ 0.42
CCDC38-203ENST00000546803 CCSER2Q9H7U1 834 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 NMUR1Q9HB89 426 aa17.66■□□□□ 0.42
CCDC38-203ENST00000546803 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.66■□□□□ 0.42
CCDC38-203ENST00000546803 ZNF263O14978 683 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 CHADO15335 359 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 NARSO43776 548 aaKnown RBP17.65■□□□□ 0.42
CCDC38-203ENST00000546803 MBL2P11226 248 aaPredicted RBP17.65■□□□□ 0.42
CCDC38-203ENST00000546803 RARGP13631 454 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 CDH5P33151 784 aaPredicted RBP17.65■□□□□ 0.42
CCDC38-203ENST00000546803 ATP5C1P36542 298 aaKnown RBP17.65■□□□□ 0.42
CCDC38-203ENST00000546803 YWHAGP61981 247 aaKnown RBP eCLIP17.65■□□□□ 0.42
CCDC38-203ENST00000546803 GPC5P78333 572 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 PLCB2Q00722 1185 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 CDR2Q01850 454 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 GRM2Q14416 872 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 ARHGAP29Q52LW3 1261 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 TAF3Q5VWG9 929 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 PASD1Q8IV76 773 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 WDTC1Q8N5D0 677 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 SH3RF2Q8TEC5 729 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 IRF7Q92985 503 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 LRRC3BQ96PB8 259 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 BRD9Q9H8M2 597 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 TRPV5Q9NQA5 729 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 OSER1Q9NX31 292 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 WNT16Q9UBV4 365 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 DNMT3LQ9UJW3 386 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 NOCTQ9UK39 431 aaKnown RBP17.65■□□□□ 0.42
CCDC38-203ENST00000546803 CCL26Q9Y258 94 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 CPQQ9Y646 472 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 DOCK6Q96HP0 2047 aa17.65■□□□□ 0.42
CCDC38-203ENST00000546803 UNC80Q8N2C7 3258 aa17.64■□□□□ 0.42
CCDC38-203ENST00000546803 A0A1W2PQJ5 194 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 GDI1P31150 447 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 USP4Q13107 963 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 ZNF77Q15935 545 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 C10orf120Q5SQS8 335 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 BSPRYQ5W0U4 402 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 BTBD8Q5XKL5 378 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 CC2D1AQ6P1N0 951 aaPredicted RBP17.64■□□□□ 0.41
CCDC38-203ENST00000546803 TRIM72Q6ZMU5 477 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 BHLHA9Q7RTU4 235 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 C1orf131Q8NDD1 294 aaKnown RBP17.64■□□□□ 0.41
CCDC38-203ENST00000546803 GOLGA1Q92805 767 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 DNASE1L2Q92874 299 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 PPP1R13BQ96KQ4 1090 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 TRIM62Q9BVG3 475 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 NUCKS1Q9H1E3 243 aaKnown RBP17.64■□□□□ 0.41
CCDC38-203ENST00000546803 SMOC2Q9H3U7 446 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 EPHX3Q9H6B9 360 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 ABCC13Q9NSE7 274 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 CYTH4Q9UIA0 394 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 ITIH6Q6UXX5 1313 aa17.64■□□□□ 0.41
CCDC38-203ENST00000546803 YJEFN3A6XGL0 299 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 E5RJQ4 531 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 E7ENQ6 273 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 LEFTY2O00292 366 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 PIK3R2O00459 728 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 MMEP08473 750 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 ARID5AQ03989 594 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 MTF1Q14872 753 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 SARM1Q6SZW1 724 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 TRIM67Q6ZTA4 783 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 RSRC2Q7L4I2 434 aaKnown RBP17.63■□□□□ 0.41
CCDC38-203ENST00000546803 SCUBE3Q8IX30 993 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 MSANTD4Q8NCY6 345 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 ZNF397Q8NF99 534 aaPredicted RBP17.63■□□□□ 0.41
CCDC38-203ENST00000546803 IPO4Q8TEX9 1081 aaKnown RBP17.63■□□□□ 0.41
CCDC38-203ENST00000546803 NDRG1Q92597 394 aaKnown RBP17.63■□□□□ 0.41
CCDC38-203ENST00000546803 MIS12Q9H081 205 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 RBSNQ9H1K0 784 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 OLA1Q9NTK5 396 aaKnown RBP17.63■□□□□ 0.41
CCDC38-203ENST00000546803 SMPD4Q9NXE4 827 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 AIPL1Q9NZN9 384 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 FBXL21Q9UKT6 434 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.63■□□□□ 0.41
CCDC38-203ENST00000546803 DOCK8Q8NF50 2099 aa17.63■□□□□ 0.41
CCDC38-203ENST00000546803 LRRC53A6NM62 1247 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 PAPSS1O43252 624 aaPredicted RBP17.62■□□□□ 0.41
CCDC38-203ENST00000546803 TBX18O95935 607 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms