RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 IRAK3Q9Y616 596 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 DENND4AQ7Z401 1863 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 NCOR1O75376 2440 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 C2orf71A6NGG8 1288 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 HIDE1A8MVS5 230 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 H7C4K7 107 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 TEX28O15482 410 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 LRRN2O75325 713 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 TACC1O75410 805 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 SERPINC1P01008 464 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 CNPP09543 421 aaKnown RBP6.75□□□□□ -1.33
PRKDC-211ENST00000546304 FOSL2P15408 326 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 RPL17P18621 184 aaKnown RBP6.75□□□□□ -1.33
PRKDC-211ENST00000546304 WARSP23381 471 aaKnown RBP6.75□□□□□ -1.33
PRKDC-211ENST00000546304 ITPKAP23677 461 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 TBXAS1P24557 533 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-211ENST00000546304 PCSK1P29120 753 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 GCNT1Q02742 428 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 PCDH1Q08174 1060 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 INCA1Q0VD86 236 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 CUL2Q13617 745 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 CTXN3Q4LDR2 81 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 LIMS2Q7Z4I7 341 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 ADGRD2Q7Z7M1 963 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 OSTM1Q86WC4 334 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 METTL23Q86XA0 190 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 PPM1KQ8N3J5 372 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 MRPL43Q8N983 215 aaKnown RBP6.75□□□□□ -1.33
PRKDC-211ENST00000546304 OR10T2Q8NGX3 314 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 LMO3Q8TAP4 145 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 LNX1Q8TBB1 728 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-211ENST00000546304 MICAL1Q8TDZ2 1067 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 MYLIPQ8WY64 445 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 FAXDC2Q96IV6 333 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 CDX2Q99626 313 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-211ENST00000546304 RTP3Q9BQQ7 232 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 LSM14BQ9BX40 385 aaKnown RBP6.75□□□□□ -1.33
PRKDC-211ENST00000546304 EMILIN2Q9BXX0 1053 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 BCO2Q9BYV7 579 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 NRSN2Q9GZP1 204 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 SDCBP2Q9H190 292 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 CYP3A43Q9HB55 503 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 MTMR10Q9NXD2 777 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 LMCD1Q9NZU5 365 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 APEX2Q9UBZ4 518 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 HMGXB4Q9UGU5 601 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 FBXL5Q9UKA1 691 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 SSX2IPQ9Y2D8 614 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 RAXQ9Y2V3 346 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 BACE2Q9Y5Z0 518 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 MTCH2Q9Y6C9 303 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 CDY1Q9Y6F8 540 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 GREB1Q4ZG55 1949 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 ZNF638Q14966 1978 aaKnown RBP6.75□□□□□ -1.33
PRKDC-211ENST00000546304 OBSL1O75147 1896 aa6.75□□□□□ -1.33
PRKDC-211ENST00000546304 DOCK6Q96HP0 2047 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 LOC100289279A0A1B0GTE1 492 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 FSD2A1L4K1 749 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 LRRC10BA6NIK2 292 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 OR6C75A6NL08 312 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 GABRDO14764 452 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 ADAM12O43184 909 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 HCRTO43612 131 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 TBC1D4O60343 1298 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 OAZ2O95190 189 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 CXCL14O95715 111 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 CD58P19256 250 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 FSTP19883 344 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 POU3F3P20264 500 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-211ENST00000546304 ACAT1P24752 427 aaKnown RBP6.74□□□□□ -1.33
PRKDC-211ENST00000546304 PON1P27169 355 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 NRIP1P48552 1158 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 LHX1P48742 406 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 PSMC1P62191 440 aaKnown RBP6.74□□□□□ -1.33
PRKDC-211ENST00000546304 YWHAEP62258 255 aaKnown RBP6.74□□□□□ -1.33
PRKDC-211ENST00000546304 FANCCQ00597 558 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 TSPY1Q01534 308 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 ROR1Q01973 937 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 UBXN1Q04323 297 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 LRMPQ12912 555 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 MRPL58Q14197 206 aaKnown RBP6.74□□□□□ -1.33
PRKDC-211ENST00000546304 SYCP1Q15431 976 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 DUSP6Q16828 381 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 CCDC142Q17RM4 750 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 ZNF423Q2M1K9 1284 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 FILIP1LQ4L180 1135 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 TCEAL5Q5H9L2 206 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 SLC8B1Q6J4K2 584 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 DPH6Q7L8W6 267 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 GAS2L3Q86XJ1 694 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 ARHGEF19Q8IW93 802 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 TTC39CQ8N584 583 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 UTP4Q969X6 686 aaKnown RBP6.74□□□□□ -1.33
PRKDC-211ENST00000546304 MYRFLQ96LU7 910 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 ERGIC2Q96RQ1 377 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 CDCA3Q99618 268 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-211ENST00000546304 SYT15Q9BQS2 421 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 CLSTN3Q9BQT9 956 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 MRPL45Q9BRJ2 306 aaKnown RBP6.74□□□□□ -1.33
PRKDC-211ENST00000546304 TMPRSS13Q9BYE2 586 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms