RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 SYTL5Q8TDW5 730 aaPredicted RBP12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 ALG3Q92685 438 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 PABPC5Q96DU9 382 aaKnown RBP12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 RIC8BQ9NVN3 520 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 AP4E1Q9UPM8 1137 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 AFF2P51816 1311 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 RAG1P15918 1043 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 AVPR1AP37288 418 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 RAP1GAPP47736 663 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 NUP107P57740 925 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 MAP4K3Q8IVH8 894 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 POU5F2Q8N7G0 328 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 MAGEC3Q8TD91 643 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 VPS50Q96JG6 964 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 MAML3Q96JK9 1138 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 TRIM54Q9BYV2 358 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 NRDE2Q9H7Z3 1164 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 RPL26L1Q9UNX3 145 aaKnown RBP12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 C2CD2Q9Y426 696 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 CASZ1Q86V15 1759 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 TISP43B9A030 160 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 NDUFS3O75489 264 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 TMCC1O94876 653 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 ITGA9Q13797 1035 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 TCHHL1Q5QJ38 904 aaPredicted RBP12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 ARHGAP22Q7Z5H3 698 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 UNC45BQ8IWX7 931 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 TMEM176AQ96HP8 235 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 PRMT6Q96LA8 375 aaPredicted RBP12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 PDCD2LQ9BRP1 358 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 CATSPERBQ9H7T0 1116 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 COG4Q9H9E3 785 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 CYP3A43Q9HB55 503 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 CORO1CQ9ULV4 474 aaPredicted RBP12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 SPATA31A5Q5VU36 1347 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 SPATA31A7Q8IWB4 1347 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 M0QYT0 321 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 FSCN2O14926 492 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 ARHGEF9O43307 516 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 ENTPD5O75356 428 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 MYO1DO94832 1006 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 GLRBP48167 497 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 GCLCP48506 637 aaPredicted RBP12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 RIPK1Q13546 671 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 ZNF268Q14587 947 aaPredicted RBP12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 BMT2Q1RMZ1 405 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 IARS2Q9NSE4 1012 aaKnown RBP12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 ERAP1Q9NZ08 941 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 USP1O94782 785 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 RARBP10826 455 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 MPP3Q13368 585 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 NIPA1Q7RTP0 329 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 ACOT1Q86TX2 421 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 MPP4Q96JB8 637 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 ZFRQ96KR1 1074 aaKnown RBP12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 ACP6Q9NPH0 428 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 CASS4Q9NQ75 786 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 PXMP2Q9NR77 195 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 V9GYQ6 96 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 MROH7Q68CQ1 1323 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 TCHHQ07283 1943 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 BCL9O00512 1426 aa12.61□□□□□ -0.39
NPC1L1-204ENST00000546276 TNPO2O14787 897 aaKnown RBP12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 SUPT7LO94864 414 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 GJB6O95452 261 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 ATP6V1C1P21283 382 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 PSMD7P51665 324 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 MRPS15P82914 257 aaKnown RBP12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 MAP3K10Q02779 954 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 TRIM16LQ309B1 348 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 ZBTB49Q6ZSB9 765 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 SLC9A9Q8IVB4 645 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 CHCHD3Q9NX63 227 aaKnown RBP12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 APPL1Q9UKG1 709 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 DRG1Q9Y295 367 aaKnown RBP12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 APOC4-APOC2K7ER74 178 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 LIASO43766 372 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 WFS1O76024 890 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 TNFAIP8O95379 198 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 APOC2P02655 101 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 NCAM1P13591 858 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 VCAM1P19320 739 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 CYP2F1P24903 491 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 NFKBIAP25963 317 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 CACNB2Q08289 660 aaPredicted RBP12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 GJD4Q96KN9 370 aaPredicted RBP12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 TBCBQ99426 244 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 DDX4Q9NQI0 724 aaKnown RBP12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 TRDMT1O14717 391 aaKnown RBP12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 AHCYL1O43865 530 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 PYGLP06737 847 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 S100A5P33763 92 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 KIZQ2M2Z5 673 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 PARP6Q2NL67 630 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 CCDC153Q494R4 210 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 STKLD1Q8NE28 680 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 B4GALNT2Q8NHY0 566 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 FAM162AQ96A26 154 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms