RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 TUBP50607 506 aa21.53■■□□□ 1.04
HMGA2-211ENST00000545998 ZBED6P86452 979 aa21.53■■□□□ 1.04
HMGA2-211ENST00000545998 HECTD3Q5T447 861 aa21.53■■□□□ 1.04
HMGA2-211ENST00000545998 SFMBT2Q5VUG0 894 aa21.53■■□□□ 1.04
HMGA2-211ENST00000545998 TMEM35BQ8NCS4 154 aa21.53■■□□□ 1.04
HMGA2-211ENST00000545998 CPLX3Q8WVH0 158 aa21.53■■□□□ 1.04
HMGA2-211ENST00000545998 NDRG1Q92597 394 aaKnown RBP21.53■■□□□ 1.04
HMGA2-211ENST00000545998 ELSPBP1Q96BH3 223 aa21.53■■□□□ 1.04
HMGA2-211ENST00000545998 CPXM1Q96SM3 734 aa21.53■■□□□ 1.04
HMGA2-211ENST00000545998 ZFP14Q9HCL3 533 aa21.53■■□□□ 1.04
HMGA2-211ENST00000545998 ECI2O75521 394 aa21.52■■□□□ 1.04
HMGA2-211ENST00000545998 PRAMEF12O95522 483 aa21.52■■□□□ 1.04
HMGA2-211ENST00000545998 PSEN1P49768 467 aa21.52■■□□□ 1.04
HMGA2-211ENST00000545998 DAOAP59103 153 aa21.52■■□□□ 1.04
HMGA2-211ENST00000545998 ASIC2Q16515 512 aa21.52■■□□□ 1.04
HMGA2-211ENST00000545998 ARL14EPQ8N8R7 260 aaPredicted RBP21.52■■□□□ 1.04
HMGA2-211ENST00000545998 ZNF397Q8NF99 534 aaPredicted RBP21.52■■□□□ 1.04
HMGA2-211ENST00000545998 PPP1R13BQ96KQ4 1090 aa21.52■■□□□ 1.04
HMGA2-211ENST00000545998 KXD1Q9BQD3 176 aa21.52■■□□□ 1.04
HMGA2-211ENST00000545998 RPP25Q9BUL9 199 aaKnown RBP21.52■■□□□ 1.04
HMGA2-211ENST00000545998 RNF38Q9H0F5 515 aa21.52■■□□□ 1.04
HMGA2-211ENST00000545998 SMG9Q9H0W8 520 aaKnown RBP21.52■■□□□ 1.04
HMGA2-211ENST00000545998 NUCKS1Q9H1E3 243 aaKnown RBP21.52■■□□□ 1.04
HMGA2-211ENST00000545998 CCSER2Q9H7U1 834 aa21.52■■□□□ 1.04
HMGA2-211ENST00000545998 LUC7L2Q9Y383 392 aaKnown RBP21.52■■□□□ 1.04
HMGA2-211ENST00000545998 E5RJQ4 531 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 FBXO21O94952 628 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 HDCP19113 662 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 CASP14P31944 242 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 VIPR2P41587 438 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 TRIM14Q14142 442 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 SCUBE3Q8IX30 993 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 ARHGAP18Q8N392 663 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 CLEC4CQ8WTT0 213 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 IRGQQ8WZA9 623 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 SYN2Q92777 582 aaPredicted RBP21.51■■□□□ 1.03
HMGA2-211ENST00000545998 USP13Q92995 863 aaPredicted RBP21.51■■□□□ 1.03
HMGA2-211ENST00000545998 RSPRY1Q96DX4 576 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 NOX5Q96PH1 765 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 AGPAT1Q99943 283 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.51■■□□□ 1.03
HMGA2-211ENST00000545998 CLIC5Q9NZA1 410 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 TJP2Q9UDY2 1190 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 NAGPAQ9UK23 515 aa21.51■■□□□ 1.03
HMGA2-211ENST00000545998 YJEFN3A6XGL0 299 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 E7ENQ6 273 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 COCHO43405 550 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 TLR5O60602 858 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 CYP1A1P04798 512 aaPredicted RBP21.5■■□□□ 1.03
HMGA2-211ENST00000545998 CKMP06732 381 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 PRKCIP41743 596 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 ZNF75DP51815 510 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 YWHAGP61981 247 aaKnown RBP eCLIP21.5■■□□□ 1.03
HMGA2-211ENST00000545998 NOMO3P69849 1222 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 ZNF268Q14587 947 aaPredicted RBP21.5■■□□□ 1.03
HMGA2-211ENST00000545998 PTPN20Q4JDL3 420 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 SLC44A3Q8N4M1 653 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 ZNF276Q8N554 614 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 E2F7Q96AV8 911 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 SYT11Q9BT88 431 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 PLA2G2FQ9BZM2 168 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 MIS12Q9H081 205 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 TDP1Q9NUW8 608 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 CCL26Q9Y258 94 aa21.5■■□□□ 1.03
HMGA2-211ENST00000545998 PAPSS1O43252 624 aaPredicted RBP21.49■■□□□ 1.03
HMGA2-211ENST00000545998 RARGP13631 454 aa21.49■■□□□ 1.03
HMGA2-211ENST00000545998 SLC7A9P82251 487 aa21.49■■□□□ 1.03
HMGA2-211ENST00000545998 TRIM72Q6ZMU5 477 aa21.49■■□□□ 1.03
HMGA2-211ENST00000545998 OLIG1Q8TAK6 271 aa21.49■■□□□ 1.03
HMGA2-211ENST00000545998 LRRC3BQ96PB8 259 aa21.49■■□□□ 1.03
HMGA2-211ENST00000545998 PCDHB18PQ96TA0 734 aa21.49■■□□□ 1.03
HMGA2-211ENST00000545998 COL25A1Q9BXS0 654 aaPredicted RBP21.49■■□□□ 1.03
HMGA2-211ENST00000545998 OBP2AQ9NY56 170 aa21.49■■□□□ 1.03
HMGA2-211ENST00000545998 KIF26AQ9ULI4 1882 aaPredicted RBP21.49■■□□□ 1.03
HMGA2-211ENST00000545998 HEPACAM2A8MVW5 462 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 NAA35Q5VZE5 725 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 VITQ6UXI7 678 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 HFE2Q6ZVN8 426 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 CELF5Q8N6W0 485 aaKnown RBP21.48■■□□□ 1.03
HMGA2-211ENST00000545998 CPA5Q8WXQ8 436 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 MRFAP1L1Q96HT8 127 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 HAUS4Q9H6D7 363 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 KIF9Q9HAQ2 790 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 MUTYHQ9UIF7 546 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 ARHGAP26Q9UNA1 814 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 TBX18O95935 607 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 ERBB2P04626 1255 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 RALAP11233 206 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 UNGP13051 313 aaPredicted RBP21.48■■□□□ 1.03
HMGA2-211ENST00000545998 ZXDBP98169 803 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 TDGQ13569 410 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 BSPRYQ5W0U4 402 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 KLHDC10Q6PID8 442 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 MFSD6LQ8IWD5 586 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 SORCS3Q9UPU3 1222 aa21.48■■□□□ 1.03
HMGA2-211ENST00000545998 DPYSL4O14531 572 aa21.47■■□□□ 1.03
HMGA2-211ENST00000545998 SART1O43290 800 aaKnown RBP21.47■■□□□ 1.03
HMGA2-211ENST00000545998 GABRB2P47870 512 aa21.47■■□□□ 1.03
HMGA2-211ENST00000545998 SNX16P57768 344 aa21.47■■□□□ 1.03
HMGA2-211ENST00000545998 KLHL30Q0D2K2 578 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms