RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 FER1L4A9Z1Z3 1794 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 CYB561D2O14569 222 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 ALADP13716 330 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 SREBF2Q12772 1141 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 PKN3Q6P5Z2 889 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 SAMD7Q7Z3H4 446 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 MREGQ8N565 214 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 APOPT1Q96IL0 206 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 INTS13Q9NVM9 706 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 DDX20Q9UHI6 824 aaKnown RBP12.93□□□□□ -0.34
COL4A6-209ENST00000545689 ANKRD6Q9Y2G4 727 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 C3P01024 1663 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 HEATR9A2RTY3 570 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 GRIN3BO60391 1043 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 EFCAB14O75071 495 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 VPS26AO75436 327 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 EIF4BP23588 611 aaKnown RBP12.93□□□□□ -0.34
COL4A6-209ENST00000545689 AXLP30530 894 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 OVGP1Q12889 678 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 CACHD1Q5VU97 1274 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 PLEKHH3Q7Z736 793 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 ZNF526Q8TF50 670 aaPredicted RBP12.93□□□□□ -0.34
COL4A6-209ENST00000545689 TSR3Q9UJK0 312 aaKnown RBP12.93□□□□□ -0.34
COL4A6-209ENST00000545689 RUVBL2Q9Y230 463 aaKnown RBP12.93□□□□□ -0.34
COL4A6-209ENST00000545689 STX7O15400 261 aaKnown RBP12.93□□□□□ -0.34
COL4A6-209ENST00000545689 HOXA2O43364 376 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 KDM1AO60341 852 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 ETFBP38117 255 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 RPL21P46778 160 aaKnown RBP12.93□□□□□ -0.34
COL4A6-209ENST00000545689 ZRANB3Q5FWF4 1079 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 TSHRP16473 764 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 CYP2F1P24903 491 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 CLCN3P51790 818 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 LRRC36Q1X8D7 754 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 ZC3H12BQ5HYM0 836 aaKnown RBP12.93□□□□□ -0.34
COL4A6-209ENST00000545689 HORMAD1Q86X24 394 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 CNDP1Q96KN2 507 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 CDK5RAP1Q96SZ6 601 aaKnown RBP12.93□□□□□ -0.34
COL4A6-209ENST00000545689 MMADHCQ9H3L0 296 aaPredicted RBP12.93□□□□□ -0.34
COL4A6-209ENST00000545689 VTI1BQ9UEU0 232 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 PGAM1P18669 254 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 OR1G1P47890 313 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 KCNT1Q5JUK3 1230 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 SPANXN3Q5MJ09 141 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 PLD3Q8IV08 490 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 ZKSCAN4Q969J2 545 aaPredicted RBP12.92□□□□□ -0.34
COL4A6-209ENST00000545689 SEMA4AQ9H3S1 761 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 SYTL2Q9HCH5 934 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 TUBGCP4Q9UGJ1 667 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.92□□□□□ -0.34
COL4A6-209ENST00000545689 CCDC78A2IDD5 438 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 F5H5T6 163 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 ALDH1A3P47895 512 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 PCYT1AP49585 367 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 ZNF177Q13360 481 aaPredicted RBP12.92□□□□□ -0.34
COL4A6-209ENST00000545689 RASA2Q15283 850 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 FAXCQ5TGI0 409 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 ZCCHC9Q8N567 271 aaKnown RBP12.92□□□□□ -0.34
COL4A6-209ENST00000545689 ZNF606Q8WXB4 792 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 ZNF333Q96JL9 665 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 PCDHB7Q9Y5E2 793 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 RAD54BQ9Y620 910 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 CPA3P15088 417 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 CHRM3P20309 590 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 TWF1Q12792 350 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 SEZ6Q53EL9 994 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 ACTL9Q8TC94 416 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 SPATA16Q9BXB7 569 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 TMEM134Q9H6X4 195 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 NMRK1Q9NWW6 199 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 MPP6Q9NZW5 540 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 TRHDEQ9UKU6 1024 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 DNAJC16Q9Y2G8 782 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 TRDMT1O14717 391 aaKnown RBP12.92□□□□□ -0.34
COL4A6-209ENST00000545689 FCGR1AP12314 374 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 CYP2B6P20813 491 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 S100A5P33763 92 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 AQP5P55064 265 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 TRIM69Q86WT6 500 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 YAF2Q8IY57 180 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 TATDN2Q93075 761 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 LRRC39Q96DD0 335 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 LRRC4BQ9NT99 713 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 NINJ2Q9NZG7 142 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 GGA2Q9UJY4 613 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 RNF112Q9ULX5 631 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 PRRG1O14668 218 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 ALBP02768 609 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 STRA8Q7Z7C7 330 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 RMND5AQ9H871 391 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 ADARB2Q9NS39 739 aaKnown RBP12.92□□□□□ -0.34
COL4A6-209ENST00000545689 NCKIPSDQ9NZQ3 722 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 SUFUQ9UMX1 484 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 ACOT9Q9Y305 439 aa12.92□□□□□ -0.34
COL4A6-209ENST00000545689 LOC100653049A0A140TA62 436 aa12.91□□□□□ -0.34
COL4A6-209ENST00000545689 KRT34O76011 436 aa12.91□□□□□ -0.34
COL4A6-209ENST00000545689 ATP6V1G2O95670 118 aa12.91□□□□□ -0.34
COL4A6-209ENST00000545689 CRTAMO95727 393 aa12.91□□□□□ -0.34
COL4A6-209ENST00000545689 CPA2P48052 419 aa12.91□□□□□ -0.34
COL4A6-209ENST00000545689 NPY2RP49146 381 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms