RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 NAA20P61599 178 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 PLD1Q13393 1074 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 TSHZ1Q6ZSZ6 1077 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 CBWD2Q8IUF1 395 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 SLC22A9Q8IVM8 553 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 FAM71DQ8N9W8 422 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 MAGEB18Q96M61 343 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 ADGRE3Q9BY15 652 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 RMND5AQ9H871 391 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 SENP2Q9HC62 589 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 NAV1Q8NEY1 1877 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 NPM3O75607 178 aaKnown RBP9.31□□□□□ -0.92
NECAP1-207ENST00000544891 OCM2P0CE71 109 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 OCMP0CE72 109 aaPredicted RBP9.31□□□□□ -0.92
NECAP1-207ENST00000544891 HSD17B3P37058 310 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 CACNB2Q08289 660 aaPredicted RBP9.31□□□□□ -0.92
NECAP1-207ENST00000544891 TMED1Q13445 227 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 PREPLQ4J6C6 727 aaPredicted RBP9.31□□□□□ -0.92
NECAP1-207ENST00000544891 LONP2Q86WA8 852 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 HERC6Q8IVU3 1022 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 USP33Q8TEY7 942 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 OSCP1Q8WVF1 389 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 PHF21AQ96BD5 680 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 LRRC39Q96DD0 335 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 TSPAN18Q96SJ8 248 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 PRDM5Q9NQX1 630 aaPredicted RBP9.31□□□□□ -0.92
NECAP1-207ENST00000544891 POLLQ9UGP5 575 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 AP3M1Q9Y2T2 418 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 IPPQ9Y573 584 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 QSER1Q2KHR3 1735 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 NRXN2Q9P2S2 1712 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 HACD1B0YJ81 288 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 GOLGA8RI6L899 631 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 CYB561D2O14569 222 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 ZSCAN9O15535 394 aaPredicted RBP9.31□□□□□ -0.92
NECAP1-207ENST00000544891 ACO1P21399 889 aaKnown RBP9.31□□□□□ -0.92
NECAP1-207ENST00000544891 CLEC16AQ2KHT3 1053 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 FBXO47Q5MNV8 452 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 RETSATQ6NUM9 610 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 ADGRF2Q8IZF7 708 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 CLEC4FQ8N1N0 589 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 UBA3Q8TBC4 463 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 ACER1Q8TDN7 264 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 SOCS4Q8WXH5 440 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 JADE3Q92613 823 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 FBXO32Q969P5 355 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 ARL8AQ96BM9 186 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 THAP11Q96EK4 314 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 NR1H4Q96RI1 486 aaPredicted RBP9.31□□□□□ -0.92
NECAP1-207ENST00000544891 MRPL9Q9BYD2 267 aaKnown RBP9.31□□□□□ -0.92
NECAP1-207ENST00000544891 ABHD16BQ9H3Z7 469 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 WDR41Q9HAD4 459 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 H2AFY2Q9P0M6 372 aaPredicted RBP9.31□□□□□ -0.92
NECAP1-207ENST00000544891 SLC39A10Q9ULF5 831 aa9.31□□□□□ -0.92
NECAP1-207ENST00000544891 BARX2Q9UMQ3 279 aaPredicted RBP9.31□□□□□ -0.92
NECAP1-207ENST00000544891 FRMPD4Q14CM0 1322 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 VCAM1P19320 739 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 TKTP29401 623 aaKnown RBP9.3□□□□□ -0.92
NECAP1-207ENST00000544891 VCPP55072 806 aaKnown RBP9.3□□□□□ -0.92
NECAP1-207ENST00000544891 MGAT5Q09328 741 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 SV2AQ7L0J3 742 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 SNX31Q8N9S9 440 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 DDI1Q8WTU0 396 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 ABTB1Q969K4 478 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-207ENST00000544891 SPATC1LQ9H0A9 340 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 TMEM161AQ9NX61 479 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 NCKIPSDQ9NZQ3 722 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-207ENST00000544891 SEPT3Q9UH03 358 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 SUFUQ9UMX1 484 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 STARD13Q9Y3M8 1113 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 AKAP10O43572 662 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 RNASEH1O60930 286 aaKnown RBP9.3□□□□□ -0.92
NECAP1-207ENST00000544891 URODP06132 367 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 FCGR1AP12314 374 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 TGM3Q08188 693 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 TMEM119Q4V9L6 283 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 ZRANB3Q5FWF4 1079 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 ACBD5Q5T8D3 534 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-207ENST00000544891 SPOCD1Q6ZMY3 1216 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 ARMC2Q8NEN0 867 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 ATXN7L3BQ96GX2 97 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 GBA2Q9HCG7 927 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-207ENST00000544891 CISHQ9NSE2 258 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 FBXO28Q9NVF7 368 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 DOLKQ9UPQ8 538 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 ACOT9Q9Y305 439 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 ERI2A8K979 691 aaKnown RBP9.3□□□□□ -0.92
NECAP1-207ENST00000544891 ACKR2O00590 384 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 CELF2O95319 508 aaKnown RBP9.3□□□□□ -0.92
NECAP1-207ENST00000544891 MYCP01106 439 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-207ENST00000544891 VIL1P09327 827 aaKnown RBP9.3□□□□□ -0.92
NECAP1-207ENST00000544891 ARP10275 920 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 S100A5P33763 92 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 KCNJ1P48048 391 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 RARRES1P49788 294 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 TOB1P50616 345 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-207ENST00000544891 PRKCQQ04759 706 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 CNTN1Q12860 1018 aa9.3□□□□□ -0.92
NECAP1-207ENST00000544891 KIZQ2M2Z5 673 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms