RNA–Protein interactions for RNA: ENST00000544755.1

PDCD2-212, Transcript of programmed cell death 2, humanhuman

TSL 2

Gene PDCD2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-212ENST00000544755 SIX2Q9NPC8 291 aa16.06■□□□□ 0.16
PDCD2-212ENST00000544755 CHORDC1Q9UHD1 332 aaPredicted RBP16.06■□□□□ 0.16
PDCD2-212ENST00000544755 DNAJC12Q9UKB3 198 aa16.06■□□□□ 0.16
PDCD2-212ENST00000544755 ZDBF2Q9HCK1 2354 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 E2F8A0AVK6 867 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 RNF225M0QZC1 329 aaPredicted RBP16.05■□□□□ 0.16
PDCD2-212ENST00000544755 ZBED1O96006 694 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 MBL2P11226 248 aaPredicted RBP16.05■□□□□ 0.16
PDCD2-212ENST00000544755 UCHL3P15374 230 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 AVPR2P30518 371 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 USP8P40818 1118 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 IFNAR2P48551 515 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 TKTL1P51854 596 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 KPNA1P52294 538 aaPredicted RBP16.05■□□□□ 0.16
PDCD2-212ENST00000544755 COPB1P53618 953 aaKnown RBP16.05■□□□□ 0.16
PDCD2-212ENST00000544755 NCAPHQ15003 741 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 FILIP1LQ4L180 1135 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 KLHDC7AQ5VTJ3 777 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 PM20D1Q6GTS8 502 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 TPRG1Q6ZUI0 275 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 GPRIN1Q7Z2K8 1008 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 CPA6Q8N4T0 437 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 ST13P5Q8NFI4 369 aaPredicted RBP16.05■□□□□ 0.16
PDCD2-212ENST00000544755 SLC35F5Q8WV83 523 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 ZNF606Q8WXB4 792 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 IRGQQ8WZA9 623 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 TFAP2BQ92481 460 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 GOLGA1Q92805 767 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 NOX5Q96PH1 765 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 CYP2S1Q96SQ9 504 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 FAM83CQ9BQN1 747 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 FUCA2Q9BTY2 467 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 OLA1Q9NTK5 396 aaKnown RBP16.05■□□□□ 0.16
PDCD2-212ENST00000544755 DNMT3LQ9UJW3 386 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 NAGPAQ9UK23 515 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 CCL26Q9Y258 94 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 SIT1Q9Y3P8 196 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 CEP83Q9Y592 693 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 CPQQ9Y646 472 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 PIAS3Q9Y6X2 628 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 ZNF318Q5VUA4 2279 aa16.05■□□□□ 0.16
PDCD2-212ENST00000544755 SYCE3A1L190 88 aa16.04■□□□□ 0.16
PDCD2-212ENST00000544755 CYP26A1O43174 497 aa16.04■□□□□ 0.16
PDCD2-212ENST00000544755 COCHO43405 550 aa16.04■□□□□ 0.16
PDCD2-212ENST00000544755 THAP12O43422 761 aa16.04■□□□□ 0.16
PDCD2-212ENST00000544755 NFATC1O95644 943 aa16.04■□□□□ 0.16
PDCD2-212ENST00000544755 BRD2P25440 801 aaKnown RBP16.04■□□□□ 0.16
PDCD2-212ENST00000544755 RUNX3Q13761 415 aa16.04■□□□□ 0.16
PDCD2-212ENST00000544755 FAM71AQ8IYT1 594 aa16.04■□□□□ 0.16
PDCD2-212ENST00000544755 PJA1Q8NG27 643 aa16.04■□□□□ 0.16
PDCD2-212ENST00000544755 SLC22A12Q96S37 553 aa16.04■□□□□ 0.16
PDCD2-212ENST00000544755 LSM14BQ9BX40 385 aaKnown RBP16.04■□□□□ 0.16
PDCD2-212ENST00000544755 STK33Q9BYT3 514 aa16.04■□□□□ 0.16
PDCD2-212ENST00000544755 SMG9Q9H0W8 520 aaKnown RBP16.04■□□□□ 0.16
PDCD2-212ENST00000544755 HEBP1Q9NRV9 189 aa16.04■□□□□ 0.16
PDCD2-212ENST00000544755 GKN1Q9NS71 199 aa16.04■□□□□ 0.16
PDCD2-212ENST00000544755 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.04■□□□□ 0.16
PDCD2-212ENST00000544755 DUS2Q9NX74 493 aaKnown RBP16.04■□□□□ 0.16
PDCD2-212ENST00000544755 LSM7Q9UK45 103 aaKnown RBP16.04■□□□□ 0.16
PDCD2-212ENST00000544755 STRIP2Q9ULQ0 834 aa16.04■□□□□ 0.16
PDCD2-212ENST00000544755 PCDHGC3Q9UN70 934 aa16.04■□□□□ 0.16
PDCD2-212ENST00000544755 LEFTY2O00292 366 aa16.03■□□□□ 0.16
PDCD2-212ENST00000544755 COG7P83436 770 aa16.03■□□□□ 0.16
PDCD2-212ENST00000544755 UBXN1Q04323 297 aa16.03■□□□□ 0.16
PDCD2-212ENST00000544755 ADIGQ0VDE8 80 aa16.03■□□□□ 0.16
PDCD2-212ENST00000544755 KCNMA1Q12791 1236 aa16.03■□□□□ 0.16
PDCD2-212ENST00000544755 RAPGEF1Q13905 1077 aa16.03■□□□□ 0.16
PDCD2-212ENST00000544755 CWF19L1Q69YN2 538 aaKnown RBP16.03■□□□□ 0.16
PDCD2-212ENST00000544755 UBA3Q8TBC4 463 aa16.03■□□□□ 0.16
PDCD2-212ENST00000544755 SECISBP2LQ93073 1101 aaKnown RBP16.03■□□□□ 0.16
PDCD2-212ENST00000544755 LRRC3BQ96PB8 259 aa16.03■□□□□ 0.16
PDCD2-212ENST00000544755 ERGIC2Q96RQ1 377 aa16.03■□□□□ 0.16
PDCD2-212ENST00000544755 RNF38Q9H0F5 515 aa16.03■□□□□ 0.16
PDCD2-212ENST00000544755 LHX5Q9H2C1 402 aa16.03■□□□□ 0.16
PDCD2-212ENST00000544755 CCSER2Q9H7U1 834 aa16.03■□□□□ 0.16
PDCD2-212ENST00000544755 LTB4R2Q9NPC1 389 aa16.03■□□□□ 0.16
PDCD2-212ENST00000544755 SH3BP1Q9Y3L3 701 aa16.03■□□□□ 0.16
PDCD2-212ENST00000544755 A0A1W2PQH9 124 aa16.02■□□□□ 0.16
PDCD2-212ENST00000544755 GOLGA6L19H0YKK7 550 aa16.02■□□□□ 0.16
PDCD2-212ENST00000544755 RARGP13631 454 aa16.02■□□□□ 0.16
PDCD2-212ENST00000544755 KRT9P35527 623 aa16.02■□□□□ 0.16
PDCD2-212ENST00000544755 RPS9P46781 194 aaKnown RBP16.02■□□□□ 0.16
PDCD2-212ENST00000544755 RPL34P49207 117 aaKnown RBP16.02■□□□□ 0.16
PDCD2-212ENST00000544755 YWHAGP61981 247 aaKnown RBP eCLIP16.02■□□□□ 0.16
PDCD2-212ENST00000544755 LRRC32Q14392 662 aa16.02■□□□□ 0.16
PDCD2-212ENST00000544755 DRAP1Q14919 205 aaPredicted RBP16.02■□□□□ 0.16
PDCD2-212ENST00000544755 ZSCAN23Q3MJ62 389 aa16.02■□□□□ 0.16
PDCD2-212ENST00000544755 C10orf120Q5SQS8 335 aa16.02■□□□□ 0.16
PDCD2-212ENST00000544755 BTBD8Q5XKL5 378 aa16.02■□□□□ 0.16
PDCD2-212ENST00000544755 GJB7Q6PEY0 223 aa16.02■□□□□ 0.16
PDCD2-212ENST00000544755 RSRC2Q7L4I2 434 aaKnown RBP16.02■□□□□ 0.16
PDCD2-212ENST00000544755 DHX40Q8IX18 779 aaKnown RBP16.02■□□□□ 0.16
PDCD2-212ENST00000544755 CCDC26Q8TAB7 109 aa16.02■□□□□ 0.16
PDCD2-212ENST00000544755 FAM3CQ92520 227 aa16.02■□□□□ 0.16
PDCD2-212ENST00000544755 PCMTD1Q96MG8 357 aaPredicted RBP16.02■□□□□ 0.16
PDCD2-212ENST00000544755 NAA15Q9BXJ9 866 aaKnown RBP16.02■□□□□ 0.16
PDCD2-212ENST00000544755 ULBP1Q9BZM6 244 aa16.02■□□□□ 0.16
PDCD2-212ENST00000544755 DCLK3Q9C098 648 aa16.02■□□□□ 0.16
PDCD2-212ENST00000544755 MIS12Q9H081 205 aa16.02■□□□□ 0.16
PDCD2-212ENST00000544755 ABCC13Q9NSE7 274 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms