RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SNX24Q9Y343 169 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 TRAPPC3O43617 180 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 LIASO43766 372 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 RPL21P46778 160 aaKnown RBP20.73■□□□□ 0.91
COPS7A-218ENST00000543939 YWHAZP63104 245 aaKnown RBP20.73■□□□□ 0.91
COPS7A-218ENST00000543939 KRT17Q04695 432 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 SCYL2Q6P3W7 929 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 BBS12Q6ZW61 710 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 MREGQ8N565 214 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 FAM149B1Q96BN6 582 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 CNGB3Q9NQW8 809 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 ZDHHC18Q9NUE0 388 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 GRHL1Q9NZI5 618 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 NRP1O14786 923 aa20.72■□□□□ 0.91
COPS7A-218ENST00000543939 TADA2AO75478 443 aa20.72■□□□□ 0.91
COPS7A-218ENST00000543939 BDNFP23560 247 aa20.72■□□□□ 0.91
COPS7A-218ENST00000543939 GBP1P32455 592 aa20.72■□□□□ 0.91
COPS7A-218ENST00000543939 DAOAP59103 153 aa20.72■□□□□ 0.91
COPS7A-218ENST00000543939 PTK6Q13882 451 aa20.72■□□□□ 0.91
COPS7A-218ENST00000543939 PPP1R7Q15435 360 aa20.72■□□□□ 0.91
COPS7A-218ENST00000543939 STRADAQ7RTN6 431 aa20.72■□□□□ 0.91
COPS7A-218ENST00000543939 DEFB128Q7Z7B8 93 aa20.72■□□□□ 0.91
COPS7A-218ENST00000543939 TSEN2Q8NCE0 465 aaKnown RBP20.72■□□□□ 0.91
COPS7A-218ENST00000543939 SLC2A13Q96QE2 648 aa20.72■□□□□ 0.91
COPS7A-218ENST00000543939 NEU2Q9Y3R4 380 aa20.72■□□□□ 0.91
COPS7A-218ENST00000543939 SYN3O14994 580 aa20.71■□□□□ 0.91
COPS7A-218ENST00000543939 MDM4O15151 490 aa20.71■□□□□ 0.91
COPS7A-218ENST00000543939 GAS8O95995 478 aa20.71■□□□□ 0.91
COPS7A-218ENST00000543939 NOS2P35228 1153 aa20.71■□□□□ 0.91
COPS7A-218ENST00000543939 GJA8P48165 433 aa20.71■□□□□ 0.91
COPS7A-218ENST00000543939 CDH6P55285 790 aa20.71■□□□□ 0.91
COPS7A-218ENST00000543939 PDK2Q15119 407 aa20.71■□□□□ 0.91
COPS7A-218ENST00000543939 SLC25A52Q3SY17 297 aa20.71■□□□□ 0.91
COPS7A-218ENST00000543939 ZDHHC24Q6UX98 284 aa20.71■□□□□ 0.91
COPS7A-218ENST00000543939 DNAJC5GQ8N7S2 189 aa20.71■□□□□ 0.91
COPS7A-218ENST00000543939 NT5C3BQ969T7 300 aa20.71■□□□□ 0.91
COPS7A-218ENST00000543939 SNRNP25Q9BV90 132 aaKnown RBP20.71■□□□□ 0.91
COPS7A-218ENST00000543939 MRPL9Q9BYD2 267 aaKnown RBP20.71■□□□□ 0.91
COPS7A-218ENST00000543939 ACBD3Q9H3P7 528 aa20.71■□□□□ 0.91
COPS7A-218ENST00000543939 DMAP1Q9NPF5 467 aaPredicted RBP20.71■□□□□ 0.91
COPS7A-218ENST00000543939 ADAM28Q9UKQ2 775 aa20.71■□□□□ 0.91
COPS7A-218ENST00000543939 DNPEPQ9ULA0 475 aa20.71■□□□□ 0.91
COPS7A-218ENST00000543939 ATP11BQ9Y2G3 1177 aa20.71■□□□□ 0.91
COPS7A-218ENST00000543939 CST8O60676 142 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 SLC11A1P49279 550 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 DPYSL3Q14195 570 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 HFE2Q6ZVN8 426 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 BNIPLQ7Z465 357 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 ANKLE1Q8NAG6 615 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 FAM71BQ8TC56 605 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 CCDC114Q96M63 670 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 NPY6RQ99463 290 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 COLEC11Q9BWP8 271 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 CALN1Q9BXU9 219 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 ZCWPW1Q9H0M4 648 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 PNPLA8Q9NP80 782 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 MARCH5Q9NX47 278 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 CALCOCO1Q9P1Z2 691 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 DRG1Q9Y295 367 aaKnown RBP20.7■□□□□ 0.9
COPS7A-218ENST00000543939 ALDH2P05091 517 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 HSPA8P11142 646 aaKnown RBP20.7■□□□□ 0.9
COPS7A-218ENST00000543939 HSPA9P38646 679 aaKnown RBP20.7■□□□□ 0.9
COPS7A-218ENST00000543939 SULT1E1P49888 294 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 ATXN1P54253 815 aaKnown RBP20.7■□□□□ 0.9
COPS7A-218ENST00000543939 LMNB2Q03252 620 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 MMRN1Q13201 1228 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 BYSLQ13895 437 aaKnown RBP20.7■□□□□ 0.9
COPS7A-218ENST00000543939 DCAF6Q58WW2 860 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 ZC3H12AQ5D1E8 599 aaKnown RBP20.7■□□□□ 0.9
COPS7A-218ENST00000543939 ERMARDQ5T6L9 678 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 OTUD1Q5VV17 481 aaPredicted RBP20.7■□□□□ 0.9
COPS7A-218ENST00000543939 C4orf50Q6ZRC1 276 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 VSIG1Q86XK7 387 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 RFX6Q8HWS3 928 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 MAP7D3Q8IWC1 876 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 TTC13Q8NBP0 860 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 SLC35B2Q8TB61 432 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 NKD2Q969F2 451 aaPredicted RBP20.7■□□□□ 0.9
COPS7A-218ENST00000543939 VWCEQ96DN2 955 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 TMEM175Q9BSA9 504 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 FRMD8P1Q9BZ68 369 aaPredicted RBP20.7■□□□□ 0.9
COPS7A-218ENST00000543939 POPDC2Q9HBU9 364 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 PCDH18Q9HCL0 1135 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 GPATCH2LQ9NWQ4 482 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 HCSTQ9UBK5 93 aa20.7■□□□□ 0.9
COPS7A-218ENST00000543939 COL4A4P53420 1690 aaPredicted RBP20.69■□□□□ 0.9
COPS7A-218ENST00000543939 YJEFN3A6XGL0 299 aa20.69■□□□□ 0.9
COPS7A-218ENST00000543939 TBKBP1A7MCY6 615 aa20.69■□□□□ 0.9
COPS7A-218ENST00000543939 E7ENQ6 273 aa20.69■□□□□ 0.9
COPS7A-218ENST00000543939 ZBED1O96006 694 aa20.69■□□□□ 0.9
COPS7A-218ENST00000543939 FYNP06241 537 aa20.69■□□□□ 0.9
COPS7A-218ENST00000543939 VCPP55072 806 aaKnown RBP20.69■□□□□ 0.9
COPS7A-218ENST00000543939 BCAR1P56945 870 aa20.69■□□□□ 0.9
COPS7A-218ENST00000543939 DYNLT1P63172 113 aa20.69■□□□□ 0.9
COPS7A-218ENST00000543939 MRPL58Q14197 206 aaKnown RBP20.69■□□□□ 0.9
COPS7A-218ENST00000543939 OASLQ15646 514 aaKnown RBP20.69■□□□□ 0.9
COPS7A-218ENST00000543939 CA9Q16790 459 aa20.69■□□□□ 0.9
COPS7A-218ENST00000543939 VARS2Q5ST30 1063 aaKnown RBP20.69■□□□□ 0.9
COPS7A-218ENST00000543939 BHLHA9Q7RTU4 235 aa20.69■□□□□ 0.9
COPS7A-218ENST00000543939 SPATA2LQ8IUW3 424 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms