RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 TNNC1P63316 161 aa21.19■□□□□ 0.98
LPCAT3-211ENST00000543794 RPL6Q02878 288 aaKnown RBP21.19■□□□□ 0.98
LPCAT3-211ENST00000543794 GFPT1Q06210 699 aaPredicted RBP21.19■□□□□ 0.98
LPCAT3-211ENST00000543794 PSMD6Q15008 389 aa21.19■□□□□ 0.98
LPCAT3-211ENST00000543794 NUDT18Q6ZVK8 323 aa21.19■□□□□ 0.98
LPCAT3-211ENST00000543794 RDH13Q8NBN7 331 aa21.19■□□□□ 0.98
LPCAT3-211ENST00000543794 ZNF507Q8TCN5 953 aa21.19■□□□□ 0.98
LPCAT3-211ENST00000543794 KCNK16Q96T55 309 aa21.19■□□□□ 0.98
LPCAT3-211ENST00000543794 CGRRF1Q99675 332 aa21.19■□□□□ 0.98
LPCAT3-211ENST00000543794 SPHK2Q9NRA0 654 aa21.19■□□□□ 0.98
LPCAT3-211ENST00000543794 SH3BP1Q9Y3L3 701 aa21.19■□□□□ 0.98
LPCAT3-211ENST00000543794 MYO18AQ92614 2054 aaKnown RBP21.19■□□□□ 0.98
LPCAT3-211ENST00000543794 EIF3DO15371 548 aaKnown RBP eCLIP21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 TGFB1I1O43294 461 aa21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 TUBP50607 506 aa21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 ZNF33AQ06730 810 aa21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 CUL4AQ13619 759 aa21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 SLC39A14Q15043 492 aa21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 LRSAM1Q6UWE0 723 aa21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 EPM2AIP1Q7L775 607 aaPredicted RBP21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 RABEPKQ7Z6M1 372 aa21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 TMEM25Q86YD3 366 aa21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 BBS7Q8IWZ6 715 aa21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 DEFB119Q8N690 84 aa21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 TERB1Q8NA31 727 aa21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 SCAMP5Q8TAC9 235 aa21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 ZNF516Q92618 1163 aa21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 GTPBP2Q9BX10 602 aaKnown RBP21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 XYLT2Q9H1B5 865 aa21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 PKD1L2Q7Z442 2459 aa21.18■□□□□ 0.98
LPCAT3-211ENST00000543794 A0A1W2PQF6 199 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 FAM92AA1XBS5 289 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 OPHN1O60890 802 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 ZDHHC11BP0C7U3 371 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 NTSR1P30989 418 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 ATICP31939 592 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 RDXP35241 583 aaKnown RBP21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 CYP24A1Q07973 514 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 PAQR9Q6ZVX9 377 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 MIB1Q86YT6 1006 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 PDILTQ8N807 584 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 CCDC127Q96BQ5 260 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 LRRC27Q9C0I9 530 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 TNMDQ9H2S6 317 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 CCSER2Q9H7U1 834 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 AGPAT3Q9NRZ7 376 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 KBTBD4Q9NVX7 518 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 COMMD8Q9NX08 183 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 CALCOCO1Q9P1Z2 691 aa21.17■□□□□ 0.98
LPCAT3-211ENST00000543794 TNRC6BQ9UPQ9 1833 aaKnown RBP21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 IGHV1OR15-9A0A0B4J2B8 117 aa21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 ARHGAP33O14559 1287 aa21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 TRIM24O15164 1050 aa21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 ZNF217O75362 1048 aa21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 HOXB2P14652 356 aa21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 MYL6P60660 151 aa21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 SNRPFP62306 86 aaKnown RBP21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 FAM193AP78312 1265 aa21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 RING1Q06587 406 aa21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 TRPC3Q13507 836 aa21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 ANO4Q32M45 955 aa21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 C10orf76Q5T2E6 689 aa21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 WBP2Q969T9 261 aa21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 USP28Q96RU2 1077 aa21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 TRIM9Q9C026 710 aa21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 GZF1Q9H116 711 aaPredicted RBP21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 CD248Q9HCU0 757 aa21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 NXF1Q9UBU9 619 aaKnown RBP21.16■□□□□ 0.98
LPCAT3-211ENST00000543794 CLIC2O15247 247 aa21.15■□□□□ 0.98
LPCAT3-211ENST00000543794 CD59P13987 128 aa21.15■□□□□ 0.98
LPCAT3-211ENST00000543794 WASP42768 502 aa21.15■□□□□ 0.98
LPCAT3-211ENST00000543794 SLC5A3P53794 718 aa21.15■□□□□ 0.98
LPCAT3-211ENST00000543794 HNRNPDQ14103 355 aaKnown RBP21.15■□□□□ 0.98
LPCAT3-211ENST00000543794 SLC41A1Q8IVJ1 513 aa21.15■□□□□ 0.98
LPCAT3-211ENST00000543794 CHCHD4Q8N4Q1 142 aa21.15■□□□□ 0.98
LPCAT3-211ENST00000543794 MINDY1Q8N5J2 469 aa21.15■□□□□ 0.98
LPCAT3-211ENST00000543794 XXYLT1Q8NBI6 393 aa21.15■□□□□ 0.98
LPCAT3-211ENST00000543794 SYAP1Q96A49 352 aaPredicted RBP21.15■□□□□ 0.98
LPCAT3-211ENST00000543794 VRTNQ9H8Y1 702 aa21.15■□□□□ 0.98
LPCAT3-211ENST00000543794 DNAAF2Q9NVR5 837 aaKnown RBP21.15■□□□□ 0.98
LPCAT3-211ENST00000543794 PLXND1Q9Y4D7 1925 aa21.15■□□□□ 0.98
LPCAT3-211ENST00000543794 FREM2Q5SZK8 3169 aa21.14■□□□□ 0.98
LPCAT3-211ENST00000543794 ATP8B3O60423 1300 aa21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 A0A1W2PQD8 194 aa21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 ZBTB24O43167 697 aaPredicted RBP21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 CAPNS1P04632 268 aa21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 SYPP08247 313 aa21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 SYT1P21579 422 aa21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 CYP2J2P51589 502 aa21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 CDH8P55286 799 aa21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 E2F4Q16254 413 aa21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 ZNF423Q2M1K9 1284 aa21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 EGFLAMQ63HQ2 1017 aa21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 GRAMD4Q6IC98 578 aa21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 HTR3DQ70Z44 454 aa21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 FAM35AQ86V20 835 aa21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 IPO4Q8TEX9 1081 aaKnown RBP21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 ZNF419Q96HQ0 510 aaPredicted RBP21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 DMAP1Q9NPF5 467 aaPredicted RBP21.14■□□□□ 0.97
LPCAT3-211ENST00000543794 GMIPQ9P107 970 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms