RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 SERPINB9P50453 376 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 YWHAZP63104 245 aaKnown RBP14.28□□□□□ -0.12
VPS33A-208ENST00000543633 DGKZQ13574 1117 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 ZNF394Q53GI3 561 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 KCNT1Q5JUK3 1230 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 IER5Q5VY09 327 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 DARS2Q6PI48 645 aaKnown RBP14.28□□□□□ -0.12
VPS33A-208ENST00000543633 ARCQ7LC44 396 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 MFN1Q8IWA4 741 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 ZBTB8OSQ8IWT0 167 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 DHX37Q8IY37 1157 aaKnown RBP14.28□□□□□ -0.12
VPS33A-208ENST00000543633 NRG4Q8WWG1 115 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 WNK4Q96J92 1243 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 ZNF184Q99676 751 aaPredicted RBP14.28□□□□□ -0.12
VPS33A-208ENST00000543633 SYT15Q9BQS2 421 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 NMUR2Q9GZQ4 415 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 POPDC2Q9HBU9 364 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 DDX43Q9NXZ2 648 aaKnown RBP14.28□□□□□ -0.12
VPS33A-208ENST00000543633 CYTH4Q9UIA0 394 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 GJA3Q9Y6H8 435 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 KRT38O76015 456 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 TM7SF2O76062 418 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 IL18RAPO95256 599 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 CD48P09326 243 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 PROZP22891 400 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 ZNF143P52747 638 aaPredicted RBP14.27□□□□□ -0.12
VPS33A-208ENST00000543633 RCN2Q14257 317 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 PDK2Q15119 407 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 TEX44Q53QW1 395 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 STXBP5Q5T5C0 1151 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 OR52E8Q6IFG1 317 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 SLC30A9Q6PML9 568 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 KYAT3Q6YP21 454 aaKnown RBP14.27□□□□□ -0.12
VPS33A-208ENST00000543633 ADGRG6Q86SQ4 1221 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 E2F7Q96AV8 911 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 FAF2Q96CS3 445 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 CPXM1Q96SM3 734 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 CNPY3Q9BT09 278 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 FAM192AQ9GZU8 254 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 KLC2Q9H0B6 622 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 SDCBP2Q9H190 292 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 C12orf65Q9H3J6 166 aaKnown RBP14.27□□□□□ -0.12
VPS33A-208ENST00000543633 PDP2Q9P2J9 529 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 TAGLN3Q9UI15 199 aa14.27□□□□□ -0.12
VPS33A-208ENST00000543633 SCN4AP35499 1836 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 SPECC1L-ADORA2AF8WAN1 911 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 CSDE1O75534 798 aaKnown RBP14.27□□□□□ -0.13
VPS33A-208ENST00000543633 TOMM70O94826 608 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 ERBB2P04626 1255 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 PRKCBP05771 671 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 CD19P15391 556 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 CNTFP26441 200 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 PEX19P40855 299 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 SESN3P58005 492 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 WASHC5Q12768 1159 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 MXD4Q14582 209 aaPredicted RBP14.27□□□□□ -0.13
VPS33A-208ENST00000543633 SEZ6Q53EL9 994 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 MPZL3Q6UWV2 235 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 SCARA5Q6ZMJ2 495 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 SAMD7Q7Z3H4 446 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 ZNF526Q8TF50 670 aaPredicted RBP14.27□□□□□ -0.13
VPS33A-208ENST00000543633 WDR60Q8WVS4 1066 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 TEKT4Q8WW24 435 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 CALN1Q9BXU9 219 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 C10orf88Q9H8K7 445 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 CYP3A43Q9HB55 503 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 PLA2G4CQ9UP65 541 aa14.27□□□□□ -0.13
VPS33A-208ENST00000543633 A0A0G2JMZ2 1700 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 LRRC37A2A6NM11 1700 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 BCLAF3A2AJT9 711 aaKnown RBP14.26□□□□□ -0.13
VPS33A-208ENST00000543633 C19orf81C9J6K1 198 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 SNNO75324 88 aaPredicted RBP14.26□□□□□ -0.13
VPS33A-208ENST00000543633 HMGCRP04035 888 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 OSBPP22059 807 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 ROR2Q01974 943 aaKnown RBP14.26□□□□□ -0.13
VPS33A-208ENST00000543633 SP2Q02086 613 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 BST1Q10588 318 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 TMEM132BQ14DG7 1078 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 ZNF667Q5HYK9 610 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 DCAF15Q66K64 600 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 TIFABQ6ZNK6 161 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 TSHZ1Q6ZSZ6 1077 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 TTC7BQ86TV6 843 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 MYLK4Q86YV6 388 aaPredicted RBP14.26□□□□□ -0.13
VPS33A-208ENST00000543633 CRLF3Q8IUI8 442 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 MAP7D3Q8IWC1 876 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 CEP120Q8N960 986 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 ZNF280CQ8ND82 737 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 GATA6Q92908 595 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 PRR11Q96HE9 360 aaPredicted RBP14.26□□□□□ -0.13
VPS33A-208ENST00000543633 TCHPQ9BT92 498 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 VRTNQ9H8Y1 702 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 USP29Q9HBJ7 922 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 ALG13Q9NP73 1137 aaKnown RBP14.26□□□□□ -0.13
VPS33A-208ENST00000543633 DLGAP2Q9P1A6 1054 aa14.26□□□□□ -0.13
VPS33A-208ENST00000543633 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.26□□□□□ -0.13
VPS33A-208ENST00000543633 B2RBV5 119 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 SOCS7O14512 581 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 SMIM24O75264 130 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 FKBP6O75344 327 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms