RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 METRNLQ641Q3 311 aa6.39□□□□□ -1.39
MDM2-230ENST00000543323 SFRP4Q6FHJ7 346 aaPredicted RBP6.39□□□□□ -1.39
MDM2-230ENST00000543323 RGS7BPQ6MZT1 257 aaPredicted RBP6.39□□□□□ -1.39
MDM2-230ENST00000543323 MSANTD2Q6P1R3 559 aa6.39□□□□□ -1.39
MDM2-230ENST00000543323 RASGRP2Q7LDG7 609 aa6.39□□□□□ -1.39
MDM2-230ENST00000543323 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.39□□□□□ -1.39
MDM2-230ENST00000543323 ARMC8Q8IUR7 673 aa6.39□□□□□ -1.39
MDM2-230ENST00000543323 RHOT2Q8IXI1 618 aa6.39□□□□□ -1.39
MDM2-230ENST00000543323 ELOA2Q8IYF1 753 aaPredicted RBP6.39□□□□□ -1.39
MDM2-230ENST00000543323 MDGA1Q8NFP4 955 aa6.39□□□□□ -1.39
MDM2-230ENST00000543323 ZNF483Q8TF39 744 aaPredicted RBP6.39□□□□□ -1.39
MDM2-230ENST00000543323 TBC1D22AQ8WUA7 517 aa6.39□□□□□ -1.39
MDM2-230ENST00000543323 TMEM171Q8WVE6 324 aa6.39□□□□□ -1.39
MDM2-230ENST00000543323 KTI12Q96EK9 354 aaPredicted RBP6.39□□□□□ -1.39
MDM2-230ENST00000543323 ZBTB45Q96K62 511 aaPredicted RBP6.39□□□□□ -1.39
MDM2-230ENST00000543323 ANKEF1Q9NU02 776 aa6.39□□□□□ -1.39
MDM2-230ENST00000543323 LIN7CQ9NUP9 197 aaKnown RBP6.39□□□□□ -1.39
MDM2-230ENST00000543323 TMLHEQ9NVH6 421 aa6.39□□□□□ -1.39
MDM2-230ENST00000543323 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.39□□□□□ -1.39
MDM2-230ENST00000543323 AGPSO00116 658 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 TOR1BO14657 336 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 KLK10O43240 276 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 DOK2O60496 412 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 CBFA2T3O75081 653 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 CYP21A2P08686 494 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 MYCLP12524 364 aaPredicted RBP6.38□□□□□ -1.39
MDM2-230ENST00000543323 KCNA2P16389 499 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 TGM1P22735 817 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 HTR7P34969 479 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 HOXD12P35452 270 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 PGM1P36871 562 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 ANXA11P50995 505 aaKnown RBP6.38□□□□□ -1.39
MDM2-230ENST00000543323 CCR9P51686 369 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 PDCLQ13371 301 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 GRM7Q14831 915 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 GPR68Q15743 365 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 NRN1LQ496H8 165 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 FAM133BQ5BKY9 247 aaKnown RBP6.38□□□□□ -1.39
MDM2-230ENST00000543323 TMTC3Q6ZXV5 915 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 LRRC8DQ7L1W4 858 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 R3HCC1LQ7Z5L2 792 aaKnown RBP6.38□□□□□ -1.39
MDM2-230ENST00000543323 KRT77Q7Z794 578 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 FAM124AQ86V42 546 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 LRRC71Q8N4P6 559 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 TMEM176AQ96HP8 235 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 NEU1Q99519 415 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 PAAF1Q9BRP4 392 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 MECRQ9BV79 373 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 PLA2G12BQ9BX93 195 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 CCDC68Q9H2F9 335 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 SEC61A2Q9H9S3 476 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 ZFP64Q9NPA5 681 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 NKIRAS2Q9NYR9 191 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 HSF4Q9ULV5 492 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.38□□□□□ -1.39
MDM2-230ENST00000543323 SPATA31A3Q5VYP0 1347 aa6.38□□□□□ -1.39
MDM2-230ENST00000543323 SLC38A8A6NNN8 435 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 B4GALT3O60512 393 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 TIPRLO75663 272 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 HLA-DOAP06340 250 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 CPA1P15085 419 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 EPHA3P29320 983 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 RPS19P39019 145 aaKnown RBP6.37□□□□□ -1.39
MDM2-230ENST00000543323 STAT1P42224 750 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 NDUFV1P49821 464 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 PDE6CP51160 858 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 MC2RQ01718 297 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 KIAA2012Q0VF49 1180 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 CLCA4Q14CN2 919 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 ELAVL1Q15717 326 aaKnown RBP6.37□□□□□ -1.39
MDM2-230ENST00000543323 TBRG1Q3YBR2 411 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 DCAF17Q5H9S7 520 aaPredicted RBP6.37□□□□□ -1.39
MDM2-230ENST00000543323 ZNF484Q5JVG2 852 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 UBXN11Q5T124 520 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 FAM102AQ5T9C2 384 aaPredicted RBP6.37□□□□□ -1.39
MDM2-230ENST00000543323 CLEC9AQ6UXN8 241 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.37□□□□□ -1.39
MDM2-230ENST00000543323 CCDC129Q6ZRS4 1044 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 B4GALNT4Q76KP1 1039 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 FSTL5Q8N475 847 aaPredicted RBP6.37□□□□□ -1.39
MDM2-230ENST00000543323 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.37□□□□□ -1.39
MDM2-230ENST00000543323 LSMEM1Q8N8F7 131 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 MCRS1Q96EZ8 462 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 GHITMQ9H3K2 345 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 CNOT6Q9ULM6 557 aaKnown RBP6.37□□□□□ -1.39
MDM2-230ENST00000543323 SLC27A6Q9Y2P4 619 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 KCTD3Q9Y597 815 aa6.37□□□□□ -1.39
MDM2-230ENST00000543323 AATKQ6ZMQ8 1374 aa6.36□□□□□ -1.39
MDM2-230ENST00000543323 GXYLT2A0PJZ3 443 aa6.36□□□□□ -1.39
MDM2-230ENST00000543323 CCDC78A2IDD5 438 aa6.36□□□□□ -1.39
MDM2-230ENST00000543323 SEPT4O43236 478 aa6.36□□□□□ -1.39
MDM2-230ENST00000543323 PLOD3O60568 738 aa6.36□□□□□ -1.39
MDM2-230ENST00000543323 MED14OSP0DP75 135 aa6.36□□□□□ -1.39
MDM2-230ENST00000543323 ALOX12P18054 663 aa6.36□□□□□ -1.39
MDM2-230ENST00000543323 ADORA2AP29274 412 aa6.36□□□□□ -1.39
MDM2-230ENST00000543323 ARF3P61204 181 aaPredicted RBP6.36□□□□□ -1.39
MDM2-230ENST00000543323 ARF1P84077 181 aaKnown RBP6.36□□□□□ -1.39
MDM2-230ENST00000543323 ZNF569Q5MCW4 686 aa6.36□□□□□ -1.39
MDM2-230ENST00000543323 PIK3AP1Q6ZUJ8 805 aa6.36□□□□□ -1.39
MDM2-230ENST00000543323 CLNKQ7Z7G1 428 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms