RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 GARTP22102 1010 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 CDK7P50613 346 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 DGKKQ5KSL6 1271 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 PUS3Q9BZE2 481 aaKnown RBP19.95■□□□□ 0.78
HDAC4-215ENST00000543185 RMI1Q9H9A7 625 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 TMEM2Q9UHN6 1383 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 FYNP06241 537 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 EIF1ADQ8N9N8 165 aaKnown RBP19.95■□□□□ 0.78
HDAC4-215ENST00000543185 EXD1Q8NHP7 514 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 CASKIN2Q8WXE0 1202 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 DYNLL2Q96FJ2 89 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 INTS13Q9NVM9 706 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 GSTK1Q9Y2Q3 226 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 USP17L15C9J2P7 530 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 USP17L13C9JLJ4 530 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 USP17L11C9JVI0 530 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 USP17L18D6R9N7 530 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 USP17L22D6RA61 530 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 USP17L17D6RBQ6 530 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 USP17L19D6RCP7 530 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 USP17L20D6RJB6 530 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 RFC5P40937 340 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 USP17L24Q0WX57 530 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 DOK7Q18PE1 504 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 PAPD7Q5XG87 772 aaKnown RBP19.95■□□□□ 0.78
HDAC4-215ENST00000543185 USP17L6PQ6QN14 398 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 SLC26A11Q86WA9 606 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 FAM81AQ8TBF8 368 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 DGCR14Q96DF8 476 aaKnown RBP19.95■□□□□ 0.78
HDAC4-215ENST00000543185 TSHZ1Q6ZSZ6 1077 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 LENG1Q96BZ8 264 aaPredicted RBP19.95■□□□□ 0.78
HDAC4-215ENST00000543185 SPATA33Q96N06 139 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 MAP3K14Q99558 947 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 MUC3BQ9H195 1237 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 USP42Q9H9J4 1324 aaKnown RBP19.95■□□□□ 0.78
HDAC4-215ENST00000543185 CHN2P52757 468 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 PRKAA1Q13131 559 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 MYO5BQ9ULV0 1848 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 LOC100653049A0A140TA62 436 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 TRIM43BA6NCK2 446 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 ZC3H11AO75152 810 aaKnown RBP eCLIP19.95■□□□□ 0.78
HDAC4-215ENST00000543185 GSTT1P30711 240 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 MCL1Q07820 350 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 FEZF2Q8TBJ5 459 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 Q96MT0 163 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 ZBTB22O15209 634 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 PTPN7P35236 360 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 PNPLA4P41247 253 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 OSBPL6Q9BZF3 934 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 NOL6Q9H6R4 1146 aaKnown RBP19.94■□□□□ 0.78
HDAC4-215ENST00000543185 GAS2O43903 313 aaKnown RBP19.94■□□□□ 0.78
HDAC4-215ENST00000543185 ZNF682O95780 498 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 S100A1P23297 94 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 PUDPQ08623 228 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 EPS8L3Q8TE67 593 aaKnown RBP19.94■□□□□ 0.78
HDAC4-215ENST00000543185 ZNF518BQ9C0D4 1074 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 PAIP1Q9H074 479 aaKnown RBP19.94■□□□□ 0.78
HDAC4-215ENST00000543185 ZDHHC13Q8IUH4 622 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 CACTIN-AS1Q8N1I8 211 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 ZNF669Q96BR6 464 aaPredicted RBP19.94■□□□□ 0.78
HDAC4-215ENST00000543185 METP08581 1390 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 WWP2O00308 870 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 ATP12AP54707 1039 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 LGALS3BPQ08380 585 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 PLA2G4FQ68DD2 849 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 DHFR2Q86XF0 187 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 CAMK1DQ8IU85 385 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 ADHFE1Q8IWW8 467 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 PABPC5Q96DU9 382 aaKnown RBP19.94■□□□□ 0.78
HDAC4-215ENST00000543185 AGAP3Q96P47 875 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 AGPAT5Q9NUQ2 364 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 NR2C2P49116 596 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 ST8SIA6P61647 398 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 RTKN2Q8IZC4 609 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 ING3Q9NXR8 418 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 TFE3P19532 575 aaPredicted RBP19.94■□□□□ 0.78
HDAC4-215ENST00000543185 MSH3P20585 1137 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 GRK3P35626 688 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 GMFBP60983 142 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 SNRNP48Q6IEG0 339 aaKnown RBP19.94■□□□□ 0.78
HDAC4-215ENST00000543185 SLC30A5Q8TAD4 765 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 LDLRP01130 860 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 MTTPP55157 894 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 NFIAQ12857 509 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 SV2CQ496J9 727 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 PDPK2PQ6A1A2 396 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 KBTBD8Q8NFY9 601 aa19.94■□□□□ 0.78
HDAC4-215ENST00000543185 CPA2P48052 419 aa19.93■□□□□ 0.78
HDAC4-215ENST00000543185 RRN3Q9NYV6 651 aa19.93■□□□□ 0.78
HDAC4-215ENST00000543185 MROH7-TTC4A0A0A0MT08 1334 aa19.93■□□□□ 0.78
HDAC4-215ENST00000543185 PAICSP22234 425 aaKnown RBP19.93■□□□□ 0.78
HDAC4-215ENST00000543185 OR2W6PQ8NHA6 318 aa19.93■□□□□ 0.78
HDAC4-215ENST00000543185 OXNAD1Q96HP4 312 aaPredicted RBP19.93■□□□□ 0.78
HDAC4-215ENST00000543185 APOL5Q9BWW9 433 aa19.93■□□□□ 0.78
HDAC4-215ENST00000543185 GPR63Q9BZJ6 419 aa19.93■□□□□ 0.78
HDAC4-215ENST00000543185 NIF3L1Q9GZT8 377 aa19.93■□□□□ 0.78
HDAC4-215ENST00000543185 UBDO15205 165 aa19.93■□□□□ 0.78
HDAC4-215ENST00000543185 PECAM1P16284 738 aaPredicted RBP19.93■□□□□ 0.78
HDAC4-215ENST00000543185 CASP1P29466 404 aa19.93■□□□□ 0.78
HDAC4-215ENST00000543185 GRAPQ13588 217 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms