RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 ADH5P11766 374 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 XRCC6P12956 609 aaKnown RBP eCLIP5.13□□□□□ -1.59
LIMS1-214ENST00000542845 GP1BBP13224 206 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 GCFC2P16383 781 aaKnown RBP5.13□□□□□ -1.59
LIMS1-214ENST00000542845 IFNAR1P17181 557 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 NTSR1P30989 418 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 GRIA2P42262 883 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 GRK6P43250 576 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 PEX3P56589 373 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 SH3BP2P78314 561 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 DNAJC3Q13217 504 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 NTRK3Q16288 839 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 CALCRLQ16602 461 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 GAB4Q2WGN9 574 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 HSF5Q4G112 596 aaPredicted RBP5.13□□□□□ -1.59
LIMS1-214ENST00000542845 PRAMEF14Q5SWL7 426 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 KIAA1614Q5VZ46 1190 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 BTBD8Q5XKL5 378 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 IL27RAQ6UWB1 636 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 KDM7AQ6ZMT4 941 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 TRMT11Q7Z4G4 463 aaKnown RBP5.13□□□□□ -1.59
LIMS1-214ENST00000542845 FAM124AQ86V42 546 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 SCN4BQ8IWT1 228 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 CHPFQ8IZ52 775 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 FSIP1Q8NA03 581 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 EHBP1Q8NDI1 1231 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 SPPL2BQ8TCT7 592 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 MED8Q96G25 268 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 WBP1Q96G27 269 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 TOE1Q96GM8 510 aaKnown RBP5.13□□□□□ -1.59
LIMS1-214ENST00000542845 ACOX2Q99424 681 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 PYM1Q9BRP8 204 aaKnown RBP5.13□□□□□ -1.59
LIMS1-214ENST00000542845 MRPL4Q9BYD3 311 aaKnown RBP5.13□□□□□ -1.59
LIMS1-214ENST00000542845 ZCWPW1Q9H0M4 648 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 TMEM206Q9H813 350 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 RPF1Q9H9Y2 349 aaKnown RBP5.13□□□□□ -1.59
LIMS1-214ENST00000542845 SMPD4Q9NXE4 827 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 HSFX1Q9UBD0 423 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 UXTQ9UBK9 157 aaPredicted RBP5.13□□□□□ -1.59
LIMS1-214ENST00000542845 PCDHB5Q9Y5E4 795 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 SNX11Q9Y5W9 270 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 UNC79Q9P2D8 2635 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 A0A1W2PQF6 199 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 LACTBL1A8MY62 500 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 ESPNB1AK53 854 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 WASH3PC4AMC7 463 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 M0R2N6 131 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 CYB561D2O14569 222 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 ENC1O14682 589 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 CPLX1O14810 134 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 TRIM24O15164 1050 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 MED24O75448 989 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 TADA3O75528 432 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 DKK1O94907 266 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 LDOC1O95751 146 aaPredicted RBP5.12□□□□□ -1.59
LIMS1-214ENST00000542845 ZNF883P0CG24 379 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 SPATA31C1P0DKV0 1188 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 CYP11B2P19099 503 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 TYMPP19971 482 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 GLDCP23378 1020 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 CYP2F1P24903 491 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 CD6P30203 668 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 SCTRP47872 440 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 RCAN1P53805 252 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 GDF10P55107 478 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 LILRA4P59901 499 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 RPL10AP62906 217 aaKnown RBP5.12□□□□□ -1.59
LIMS1-214ENST00000542845 ZXDBP98169 803 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 STK3Q13188 491 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 RTP5Q14D33 572 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 SAFBQ15424 915 aaKnown RBP eCLIP5.12□□□□□ -1.59
LIMS1-214ENST00000542845 TSNAXIP1Q2TAA8 658 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 KIF19Q2TAC6 998 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 ANO4Q32M45 955 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 INTS6LQ5JSJ4 861 aaKnown RBP5.12□□□□□ -1.59
LIMS1-214ENST00000542845 LY6G5CQ5SRR4 150 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 HES3Q5TGS1 186 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 EGFLAMQ63HQ2 1017 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 HIST2H2BCQ6DN03 193 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 RHBDF2Q6PJF5 856 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 MPZL3Q6UWV2 235 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 LAYNQ6UX15 382 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 ZNF574Q6ZN55 896 aaPredicted RBP5.12□□□□□ -1.59
LIMS1-214ENST00000542845 DBX2Q6ZNG2 339 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 CAPN12Q6ZSI9 719 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 CATSPER3Q86XQ3 398 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 CACUL1Q86Y37 369 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 GATAD2AQ86YP4 633 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 MIB1Q86YT6 1006 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 DCP1BQ8IZD4 617 aaKnown RBP5.12□□□□□ -1.59
LIMS1-214ENST00000542845 ZNF248Q8NDW4 579 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 SNIP1Q8TAD8 396 aaKnown RBP5.12□□□□□ -1.59
LIMS1-214ENST00000542845 IPO4Q8TEX9 1081 aaKnown RBP5.12□□□□□ -1.59
LIMS1-214ENST00000542845 CNDP2Q96KP4 475 aaKnown RBP5.12□□□□□ -1.59
LIMS1-214ENST00000542845 NAP1L4Q99733 375 aaKnown RBP5.12□□□□□ -1.59
LIMS1-214ENST00000542845 ESYT1Q9BSJ8 1104 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 C1QTNF2Q9BXJ5 285 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 NRSN2Q9GZP1 204 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 PTPRHQ9HD43 1115 aa5.12□□□□□ -1.59
LIMS1-214ENST00000542845 KMT5AQ9NQR1 393 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms