RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 C18orf8Q96DM3 657 aa12.95□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 ALS2CR12Q96Q35 445 aa12.95□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 HINFPQ9BQA5 517 aa12.95□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 C11orf70Q9BRQ4 267 aa12.95□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 THAP2Q9H0W7 228 aa12.95□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 ZBP1Q9H171 429 aa12.95□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 SYNCQ9H7C4 482 aa12.95□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 RXFP1Q9HBX9 757 aa12.95□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 MRPL17Q9NRX2 175 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 PARVAQ9NVD7 372 aa12.95□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 CNOT8Q9UFF9 292 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 PCDHB5Q9Y5E4 795 aa12.95□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 IRAK3Q9Y616 596 aa12.95□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 PLXNA4Q9HCM2 1894 aa12.95□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 IGF2RP11717 2491 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 TRIM66O15016 1216 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 SART1O43290 800 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 AP1G2O75843 785 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 GLP2RO95838 553 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 CPB1P15086 417 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 PTPN14Q15678 1187 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 SLC39A12Q504Y0 691 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 CWF19L1Q69YN2 538 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 PDE12Q6L8Q7 609 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 MMS22LQ6ZRQ5 1243 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 PIGZQ86VD9 579 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 LRRTM3Q86VH5 581 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 VPS52Q8N1B4 723 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 SCML4Q8N228 414 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 KLHL23Q8NBE8 558 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 UBA3Q8TBC4 463 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 C8orf48Q96LL4 319 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 CPXM1Q96SM3 734 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 LZTFL1Q9NQ48 299 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 AFF4Q9UHB7 1163 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 CYTH4Q9UIA0 394 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 GUCA1BQ9UMX6 200 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 ITPR1Q14643 2758 aa12.94□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 TCRBV5S1A1TA0A578 114 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 MTMR11A4FU01 709 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 LILRB3O75022 631 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 FBXO21O94952 628 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 SDHBP21912 280 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 RRM1P23921 792 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 ROR1Q01973 937 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 MTMR3Q13615 1198 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 CAMK1Q14012 370 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 RAB33AQ14088 237 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 RAB41Q5JT25 222 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 PMF1Q6P1K2 205 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 DNAJC24Q6P3W2 148 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 ARCQ7LC44 396 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 TAS1R1Q7RTX1 841 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 SYCE1Q8N0S2 351 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 SLC35G2Q8TBE7 412 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 MCRS1Q96EZ8 462 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 B3GALT6Q96L58 329 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 TMEM209Q96SK2 561 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 NGRNQ9NPE2 291 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 TMLHEQ9NVH6 421 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 ASNSD1Q9NWL6 643 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 COMMD8Q9NX08 183 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 CDY1Q9Y6F8 540 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 R4GN57 208 aa12.93□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 E5RJQ4 531 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 CLDN5O00501 218 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 ABLIM3O94929 683 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 ERBB2P04626 1255 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 GLI1P08151 1106 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 TUFMP49411 452 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 ETF1P62495 437 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 RPL10AP62906 217 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 MAMLD1Q13495 774 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 SMC1AQ14683 1233 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 PPP1R15BQ5SWA1 713 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 C11orf63Q6NUN7 778 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 PRSS55Q6UWB4 352 aaPredicted RBP12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 RTL10Q7L3V2 364 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 ADGRD2Q7Z7M1 963 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 XYLT1Q86Y38 959 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 C17orf53Q8N3J3 647 aaPredicted RBP12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 ZNF461Q8TAF7 563 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 ZNF564Q8TBZ8 553 aaPredicted RBP12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 FNIP1Q8TF40 1166 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 IRGQQ8WZA9 623 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 ARHGEF26Q96DR7 871 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 SMOQ99835 787 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 LPIN3Q9BQK8 851 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 CLSTN3Q9BQT9 956 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 TRIM62Q9BVG3 475 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 NUP85Q9BW27 656 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 SMOC2Q9H3U7 446 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 LRRC4Q9HBW1 653 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 CNGB3Q9NQW8 809 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 ST7Q9NRC1 585 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 ABI2Q9NYB9 513 aaPredicted RBP12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 CTTNBP2NLQ9P2B4 639 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 SORCS3Q9UPU3 1222 aa12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 CNOT1A5YKK6 2376 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-IT3-201ENST00000542680 A0A0U1RQJ8 604 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms