RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 SMYD5Q6GMV2 418 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 GBP6Q6ZN66 633 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 DDX42Q86XP3 938 aaKnown RBP eCLIP16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 CREBRFQ8IUR6 639 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 RBBP8NLQ8NC74 664 aaPredicted RBP16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 ENOX1Q8TC92 643 aaKnown RBP16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 ATP2A3Q93084 1043 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 CHRDQ9H2X0 955 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 ECT2Q9H8V3 914 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 LMAN1LQ9HAT1 526 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 UBE2TQ9NPD8 197 aaPredicted RBP16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 SMPD4Q9NXE4 827 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 A0A1W2PQH9 124 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 E2F8A0AVK6 867 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 TBX18O95935 607 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 PON1P27169 355 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 GJA4P35212 333 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 PSEN1P49768 467 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 SLC8A3P57103 927 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 BST2Q10589 180 aaKnown RBP16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 CCINQ13939 588 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 EXOC3L4Q17RC7 722 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 PM20D1Q6GTS8 502 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 KLHDC10Q6PID8 442 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 ENOSF1Q7L5Y1 443 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 ADGRG2Q8IZP9 1017 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 CPA6Q8N4T0 437 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 TTC16Q8NEE8 873 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 FAM81BQ96LP2 452 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 TUBGCP2Q9BSJ2 902 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 IER2Q9BTL4 223 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 SAMSN1Q9NSI8 373 aaKnown RBP16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 CLIC5Q9NZA1 410 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 CFAP97Q9P2B7 532 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 HESX1Q9UBX0 185 aa16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.27■□□□□ 0.2
ECHDC2-223ENST00000542552 ZFHX2Q9C0A1 2572 aaPredicted RBP16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 TRDMT1O14717 391 aaKnown RBP16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 SLC9A3R1O14745 358 aaPredicted RBP16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 GREM1O60565 184 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 SETSIPP0DME0 302 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 PLA2G4AP47712 749 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 AMPD2Q01433 879 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 MTAPQ13126 283 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 PON2Q15165 354 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 STILQ15468 1287 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 VWA3BQ502W6 1294 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 TMEM196Q5HYL7 178 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 DGKKQ5KSL6 1271 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 CCDC183Q5T5S1 534 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 DPY19L2P1Q6NXN4 242 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 BHLHA9Q7RTU4 235 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 UBA3Q8TBC4 463 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 SLC35F5Q8WV83 523 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 KCTD13Q8WZ19 329 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 ATOH1Q92858 354 aaPredicted RBP16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 PHOX2BQ99453 314 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 KLF16Q9BXK1 252 aaPredicted RBP16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 NDST4Q9H3R1 872 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 SIX2Q9NPC8 291 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 SPATA6Q9NWH7 488 aaPredicted RBP16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 APEX2Q9UBZ4 518 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 NFE2L3Q9Y4A8 694 aa16.26■□□□□ 0.19
ECHDC2-223ENST00000542552 FANCMQ8IYD8 2048 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 KCNJ18B7U540 433 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 PROB1E7EW31 1015 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 GABBR2O75899 941 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 NFATC1O95644 943 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 CALCAP01258 141 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 RARGP13631 454 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 BRD2P25440 801 aaKnown RBP16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 EEF1GP26641 437 aaKnown RBP16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 ATP5C1P36542 298 aaKnown RBP16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 NBL1P41271 181 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 TKTL1P51854 596 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 MFAP3P55082 362 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 APBA1Q02410 837 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 LRRC32Q14392 662 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 GAS6Q14393 721 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 KCNJ12Q14500 433 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 GAB4Q2WGN9 574 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 HSP90AA4PQ58FG1 418 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 TCP11X2Q5H9J9 407 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 CDKAL1Q5VV42 579 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 GJB7Q6PEY0 223 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 WBP2Q969T9 261 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 FBRSL1Q9HCM7 1045 aaKnown RBP16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 FAM86C1Q9NVL1 165 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 TBC1D14Q9P2M4 693 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 NAGPAQ9UK23 515 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 FBXO4Q9UKT5 387 aa16.25■□□□□ 0.19
ECHDC2-223ENST00000542552 BECN2A8MW95 431 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 ZBED1O96006 694 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 SP9P0CG40 484 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 PRKCSHP14314 528 aaPredicted RBP16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 GALK1P51570 392 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 NR1H3Q13133 447 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 MEA1Q16626 185 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 ZNF528Q3MIS6 628 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms