RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 PSMC1P62191 440 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ATP11AP98196 1134 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PLCB3Q01970 1234 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 RNASELQ05823 741 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 SLC18A2Q05940 514 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 TRPC3Q13507 836 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 DPYSL3Q14195 570 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 KCNJ11Q14654 390 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 EFTUD2Q15029 972 aaKnown RBP eCLIP5.42□□□□□ -1.543e-6■■■■■ 41.9
ATPAF1-212ENST00000542495 ZNF394Q53GI3 561 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 OXLD1Q5BKU9 147 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 CMPK2Q5EBM0 449 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 WASHC2DQ5SRD0 308 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ZFYVE27Q5T4F4 411 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 FAM91A1Q658Y4 838 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 LBX2Q6XYB7 198 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 C3orf62Q6ZUJ4 267 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 CYP4V2Q6ZWL3 525 aaPredicted RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 NLRP9Q7RTR0 991 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PLPPR4Q7Z2D5 763 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 VSIG1Q86XK7 387 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 APOBEC3FQ8IUX4 373 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 IGDCC3Q8IVU1 814 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 EXOC8Q8IYI6 725 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ENDOVQ8N8Q3 282 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 FAM13CQ8NE31 585 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 FBXO36Q8NEA4 188 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 MIEF2Q96C03 454 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 RTP4Q96DX8 246 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 RSRC1Q96IZ7 334 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ZNF570Q96NI8 536 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 CPXM1Q96SM3 734 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 SDCBP2Q9H190 292 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ZWILCHQ9H900 591 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 RSAD1Q9HA92 442 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 RNPEPL1Q9HAU8 725 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PNPLA8Q9NP80 782 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 BATF3Q9NR55 127 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 CNTN3Q9P232 1028 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 XPO7Q9UIA9 1087 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 POLIQ9UNA4 740 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 AGTPBP1Q9UPW5 1226 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 STK38LQ9Y2H1 464 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PCDHGA11Q9Y5H2 935 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 TEX264Q9Y6I9 313 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 NUMBLQ9Y6R0 609 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 MGAMO43451 1857 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 LTBP3Q9NS15 1303 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PAPPA2Q9BXP8 1791 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 GOLGA8SH3BPF8 625 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 GOLGA8MH3BSY2 632 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 KLF11O14901 512 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 CHADO15335 359 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 KIF1CO43896 1103 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 DIAPH2O60879 1101 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 CILPO75339 1184 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 SPAG6O75602 509 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 RECKO95980 971 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 SRGAP2CP0DJJ0 459 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ATP2A2P16615 1042 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 GM2AP17900 193 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 CALB2P22676 271 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 TARSP26639 723 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PTPN4P29074 926 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 STIP1P31948 543 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 GBP2P32456 591 aaPredicted RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 GPD2P43304 727 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 MAGEA6P43360 314 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 RASSF2P50749 326 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ZNF143P52747 638 aaPredicted RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 EIF3EP60228 445 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 DYNLT1P63172 113 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 TFAMQ00059 246 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PTPN11Q06124 597 aaPredicted RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 NOMO1Q15155 1222 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 SMTNL2Q2TAL5 461 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 KCNT1Q5JUK3 1230 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 COL13A1Q5TAT6 717 aaPredicted RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ATF7IP2Q5U623 682 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 EEF1DP3Q658K8 133 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 SCARA5Q6ZMJ2 495 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 CAPN12Q6ZSI9 719 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 CLNKQ7Z7G1 428 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 RHPN2Q8IUC4 686 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ZBTB8OSQ8IWT0 167 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PDIK1LQ8N165 341 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 EMC1Q8N766 993 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 RNF149Q8NC42 400 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 TCP10LQ8TDR4 215 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 GTF3C2Q8WUA4 911 aaPredicted RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 SLC44A1Q8WWI5 657 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 RSAD2Q8WXG1 361 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 USP6NLQ92738 828 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PTPRN2Q92932 1015 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PTCD3Q96EY7 689 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 THOC1Q96FV9 657 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ANKRD36BP1Q96IX9 119 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ASB16Q96NS5 453 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 TWNKQ96RR1 684 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms