RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 POLR3BQ9NW08 1133 aaPredicted RBP17.33■□□□□ 0.36
CCND1-205ENST00000542367 TBC1D14Q9P2M4 693 aa17.33■□□□□ 0.36
CCND1-205ENST00000542367 SLC8A2Q9UPR5 921 aa17.33■□□□□ 0.36
CCND1-205ENST00000542367 SH3BP1Q9Y3L3 701 aa17.33■□□□□ 0.36
CCND1-205ENST00000542367 FRYLO94915 3013 aa17.32■□□□□ 0.36
CCND1-205ENST00000542367 CYP26A1O43174 497 aa17.32■□□□□ 0.36
CCND1-205ENST00000542367 HRO43593 1189 aa17.32■□□□□ 0.36
CCND1-205ENST00000542367 TBX18O95935 607 aa17.32■□□□□ 0.36
CCND1-205ENST00000542367 HOXA6P31267 233 aa17.32■□□□□ 0.36
CCND1-205ENST00000542367 SRSF5Q13243 272 aaKnown RBP17.32■□□□□ 0.36
CCND1-205ENST00000542367 LPAL2Q16609 132 aa17.32■□□□□ 0.36
CCND1-205ENST00000542367 TTI2Q6NXR4 508 aa17.32■□□□□ 0.36
CCND1-205ENST00000542367 RHBDF2Q6PJF5 856 aa17.32■□□□□ 0.36
CCND1-205ENST00000542367 RPLP0P6Q8NHW5 317 aa17.32■□□□□ 0.36
CCND1-205ENST00000542367 NELFBQ8WX92 580 aa17.32■□□□□ 0.36
CCND1-205ENST00000542367 SECISBP2LQ93073 1101 aaKnown RBP17.32■□□□□ 0.36
CCND1-205ENST00000542367 FAM124BQ9H5Z6 455 aaPredicted RBP17.32■□□□□ 0.36
CCND1-205ENST00000542367 OSER1Q9NX31 292 aa17.32■□□□□ 0.36
CCND1-205ENST00000542367 OTOGLQ3ZCN5 2332 aa17.32■□□□□ 0.36
CCND1-205ENST00000542367 A0A1W2PQH9 124 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 IRF1P10914 325 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 CNR2P34972 360 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 ATP5C1P36542 298 aaKnown RBP17.31■□□□□ 0.36
CCND1-205ENST00000542367 SLC6A11P48066 632 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 PXNP49023 591 aaPredicted RBP17.31■□□□□ 0.36
CCND1-205ENST00000542367 FMO5P49326 533 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 KIF11P52732 1056 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 LRMPQ12912 555 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 CUL2Q13617 745 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 SIM2Q14190 667 aaPredicted RBP17.31■□□□□ 0.36
CCND1-205ENST00000542367 CCDC40Q4G0X9 1142 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 PRR23BQ6ZRT6 265 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 WDR5BQ86VZ2 330 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 WBP2Q969T9 261 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 NMUR1Q9HB89 426 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 CYLDQ9NQC7 956 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 RAB23Q9ULC3 237 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 CTNND2Q9UQB3 1225 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 MYOFQ9NZM1 2061 aa17.31■□□□□ 0.36
CCND1-205ENST00000542367 GPR179Q6PRD1 2367 aa17.3■□□□□ 0.36
CCND1-205ENST00000542367 BICDL2A1A5D9 508 aa17.3■□□□□ 0.36
CCND1-205ENST00000542367 K7EQS6 105 aa17.3■□□□□ 0.36
CCND1-205ENST00000542367 ADH1CP00326 375 aa17.3■□□□□ 0.36
CCND1-205ENST00000542367 STX17P56962 302 aa17.3■□□□□ 0.36
CCND1-205ENST00000542367 LY6G5CQ5SRR4 150 aa17.3■□□□□ 0.36
CCND1-205ENST00000542367 FOXR2Q6PJQ5 311 aa17.3■□□□□ 0.36
CCND1-205ENST00000542367 BBS7Q8IWZ6 715 aa17.3■□□□□ 0.36
CCND1-205ENST00000542367 OTUB2Q96DC9 234 aa17.3■□□□□ 0.36
CCND1-205ENST00000542367 KLF16Q9BXK1 252 aaPredicted RBP17.3■□□□□ 0.36
CCND1-205ENST00000542367 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.3■□□□□ 0.36
CCND1-205ENST00000542367 NUDT5Q9UKK9 219 aa17.3■□□□□ 0.36
CCND1-205ENST00000542367 USP3Q9Y6I4 520 aa17.3■□□□□ 0.36
CCND1-205ENST00000542367 MYO16Q9Y6X6 1858 aa17.3■□□□□ 0.36
CCND1-205ENST00000542367 GVINP1Q7Z2Y8 2422 aa17.3■□□□□ 0.36
CCND1-205ENST00000542367 ADH5P11766 374 aa17.29■□□□□ 0.36
CCND1-205ENST00000542367 RARGP13631 454 aa17.29■□□□□ 0.36
CCND1-205ENST00000542367 UBE2HP62256 183 aa17.29■□□□□ 0.36
CCND1-205ENST00000542367 ARHGAP17Q68EM7 881 aa17.29■□□□□ 0.36
CCND1-205ENST00000542367 SYT13Q7L8C5 426 aa17.29■□□□□ 0.36
CCND1-205ENST00000542367 CCDC186Q7Z3E2 898 aa17.29■□□□□ 0.36
CCND1-205ENST00000542367 C12orf40Q86WS4 652 aa17.29■□□□□ 0.36
CCND1-205ENST00000542367 CAMKK1Q8N5S9 505 aa17.29■□□□□ 0.36
CCND1-205ENST00000542367 ANKRD52Q8NB46 1076 aa17.29■□□□□ 0.36
CCND1-205ENST00000542367 CCDC26Q8TAB7 109 aa17.29■□□□□ 0.36
CCND1-205ENST00000542367 PNKPQ96T60 521 aa17.29■□□□□ 0.36
CCND1-205ENST00000542367 UBXN6Q9BZV1 441 aa17.29■□□□□ 0.36
CCND1-205ENST00000542367 CHMP5Q9NZZ3 219 aa17.29■□□□□ 0.36
CCND1-205ENST00000542367 NAGPAQ9UK23 515 aa17.29■□□□□ 0.36
CCND1-205ENST00000542367 GMEB2Q9UKD1 530 aa17.29■□□□□ 0.36
CCND1-205ENST00000542367 CCDC163A0A0D9SF12 145 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 ANTXRLA6NF34 631 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 MDM4O15151 490 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 PMM2O15305 246 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 TBXAS1P24557 533 aaPredicted RBP17.28■□□□□ 0.36
CCND1-205ENST00000542367 ID4P47928 161 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 PSEN1P49768 467 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 SEC13P55735 322 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 YWHAEP62258 255 aaKnown RBP17.28■□□□□ 0.36
CCND1-205ENST00000542367 GAD2Q05329 585 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 MESP2Q0VG99 397 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 PAK1Q13153 545 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 DMC1Q14565 340 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 CAMK4Q16566 473 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 C2orf27AQ580R0 203 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 LAIR1Q6GTX8 287 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 KLHDC10Q6PID8 442 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 HTR3DQ70Z44 454 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 SCD5Q86SK9 330 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 PIGZQ86VD9 579 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 TMEM25Q86YD3 366 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 USP33Q8TEY7 942 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 HHIPQ96QV1 700 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 SRRTQ9BXP5 876 aaKnown RBP17.28■□□□□ 0.36
CCND1-205ENST00000542367 SPHK2Q9NRA0 654 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 DNMT3LQ9UJW3 386 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 WDR87Q6ZQQ6 2873 aa17.28■□□□□ 0.36
CCND1-205ENST00000542367 DCHS1Q96JQ0 3298 aa17.27■□□□□ 0.36
CCND1-205ENST00000542367 APODP05090 189 aa17.27■□□□□ 0.36
CCND1-205ENST00000542367 RALAP11233 206 aa17.27■□□□□ 0.36
CCND1-205ENST00000542367 CD19P15391 556 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms