RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 ETFBKMTQ8IXQ9 262 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 FAM186BQ8IYM0 893 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 SMYD4Q8IYR2 804 aaPredicted RBP12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 SPATA20Q8TB22 786 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 CYFIP2Q96F07 1278 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 P2RY11Q96G91 374 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 KLF16Q9BXK1 252 aaPredicted RBP12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 DUSP15Q9H1R2 295 aaPredicted RBP12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 ARRDC1-AS1Q9H2J1 176 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 CYP3A43Q9HB55 503 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 NMUR1Q9HB89 426 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 FAM49BQ9NUQ9 324 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 SCML2Q9UQR0 700 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 ATP8B3O60423 1300 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 SLC9A3R1O14745 358 aaPredicted RBP12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 SLC30A4O14863 429 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 EPN2O95208 641 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 KIF20AO95235 890 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 ZNF806P0C7X5 589 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 SDHBP21912 280 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 GTF2H1P32780 548 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 EIF2DP41214 584 aaKnown RBP12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 PIK3CAP42336 1068 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 PRCPP42785 496 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 PMS1P54277 932 aaKnown RBP12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 PNOCQ13519 176 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 CCDC6Q16204 474 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 EDRF1Q3B7T1 1238 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 C2orf27AQ580R0 203 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 HTR3DQ70Z44 454 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 SCD5Q86SK9 330 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 TMEM25Q86YD3 366 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 ZC3H3Q8IXZ2 948 aaKnown RBP12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 IL17RCQ8NAC3 791 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 TATDN2Q93075 761 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 EXOC4Q96A65 974 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 PNKPQ96T60 521 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 RTKNQ9BST9 563 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 TMEM8AQ9HCN3 771 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 CYLDQ9NQC7 956 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 TBC1D14Q9P2M4 693 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 USP3Q9Y6I4 520 aa12.49□□□□□ -0.41
CLSTN3-211ENST00000541667 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 SGK1O00141 431 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 TRIM24O15164 1050 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 HOXC11O43248 304 aaPredicted RBP12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 TLR5O60602 858 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 ADAM23O75077 832 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 KAT7O95251 611 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 APBB3O95704 486 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 RPL13P26373 211 aaKnown RBP12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 ADORA2BP29275 332 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 KIF11P52732 1056 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 SEC13P55735 322 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 MRPS21P82921 87 aaKnown RBP12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 SF3A2Q15428 464 aaKnown RBP12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 CRY1Q16526 586 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 COBLL1Q53SF7 1204 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 PPP1R26Q5T8A7 1209 aaPredicted RBP12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 KRT39Q6A163 491 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 DDX42Q86XP3 938 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 CCDC33Q8N5R6 958 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 OLIG1Q8TAK6 271 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 OTUB2Q96DC9 234 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 NT5C1AQ9BXI3 368 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 NIF3L1Q9GZT8 377 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 FBXO44Q9H4M3 255 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 MMP17Q9ULZ9 603 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 ATP6V1DQ9Y5K8 247 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 LAMA1P25391 3075 aa12.48□□□□□ -0.41
CLSTN3-211ENST00000541667 CYP26A1O43174 497 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 FAM200BP0CF97 657 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 ADH5P11766 374 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 GRIA2P42262 883 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 TNFRSF4P43489 277 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 RAD23BP54727 409 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 CBWD6Q4V339 395 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 CBWD3Q5JTY5 395 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 CBWD5Q5RIA9 395 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 ANKRD40Q6AI12 368 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 ZNF276Q8N554 614 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 ALLCQ8N6M5 410 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 NAT16Q8N8M0 369 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 SLC4A11Q8NBS3 891 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 NETO1Q8TDF5 533 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 ERCC4Q92889 916 aaPredicted RBP12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 CCDC47Q96A33 483 aaKnown RBP12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 ACDQ96AP0 544 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 FAXDC2Q96IV6 333 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 ARID3AQ99856 593 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 DUSP16Q9BY84 665 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 SMOC1Q9H4F8 434 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 MMRN2Q9H8L6 949 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 PNPLA8Q9NP80 782 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 ZDHHC4Q9NPG8 344 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 SPHK2Q9NRA0 654 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 RAB20Q9NX57 234 aa12.47□□□□□ -0.41
CLSTN3-211ENST00000541667 NUDT5Q9UKK9 219 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms