RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 CACNA2D2Q9NY47 1150 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 RBAKQ9NYW8 714 aaPredicted RBP12.57□□□□□ -0.4
COPA-205ENST00000541366 DEC1Q9P2X7 70 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 ITGA11Q9UKX5 1188 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 CDH9Q9ULB4 789 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 PTPRJQ12913 1337 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 MAST4O15021 2626 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 KNTC1P50748 2209 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 FAM149AA5PLN7 773 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 TRABD2BA6NFA1 517 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 CYSRT1A8MQ03 144 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 CLDN5O00501 218 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 HOXC11O43248 304 aaPredicted RBP12.56□□□□□ -0.4
COPA-205ENST00000541366 COCHO43405 550 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 NDUFS2O75306 463 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 ZNF217O75362 1048 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 PPP1R37O75864 691 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 C1QL1O75973 258 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 DDIT3P35638 169 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 UBA7P41226 1012 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 NOP14P78316 857 aaKnown RBP12.56□□□□□ -0.4
COPA-205ENST00000541366 BNC1Q01954 994 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 POSTNQ15063 836 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 RILPL1Q5EBL4 403 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 BTBD8Q5XKL5 378 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 HS2ST1Q7LGA3 356 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 TMPRSS7Q7RTY8 843 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 TRMT11Q7Z4G4 463 aaKnown RBP12.56□□□□□ -0.4
COPA-205ENST00000541366 GLRX5Q86SX6 157 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 CHPFQ8IZ52 775 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 ZCCHC9Q8N567 271 aaKnown RBP12.56□□□□□ -0.4
COPA-205ENST00000541366 HPDLQ96IR7 371 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 PHF12Q96QT6 1004 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 MRPL45Q9BRJ2 306 aaKnown RBP12.56□□□□□ -0.4
COPA-205ENST00000541366 CBWD1Q9BRT8 395 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 STRA6Q9BX79 667 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 ZNF518BQ9C0D4 1074 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 SPHK2Q9NRA0 654 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 TBC1D14Q9P2M4 693 aa12.56□□□□□ -0.4
COPA-205ENST00000541366 CHORDC1Q9UHD1 332 aaPredicted RBP12.56□□□□□ -0.4
COPA-205ENST00000541366 FNDC3AQ9Y2H6 1198 aaKnown RBP12.56□□□□□ -0.4
COPA-205ENST00000541366 E2F8A0AVK6 867 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 PRRT4C9JH25 899 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 TRIM66O15016 1216 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 TMEM191BP0C7N4 346 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 IRF1P10914 325 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 CASP5P51878 434 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 CAMK2BQ13554 666 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 TDRD10Q5VZ19 366 aaKnown RBP12.55□□□□□ -0.4
COPA-205ENST00000541366 ARL6IP4Q66PJ3 421 aaKnown RBP12.55□□□□□ -0.4
COPA-205ENST00000541366 KIAA1324Q6UXG2 1013 aaKnown RBP12.55□□□□□ -0.4
COPA-205ENST00000541366 KIAA1958Q8N8K9 716 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 MYCBPAPQ8TBZ2 947 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 LARP4BQ92615 738 aaKnown RBP12.55□□□□□ -0.4
COPA-205ENST00000541366 MRGPRX1Q96LB2 322 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 C8orf48Q96LL4 319 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 FGFBP2Q9BYJ0 223 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 MIR1-1HGQ9H1L0 117 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 DPEP3Q9H4B8 488 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 FAM124BQ9H5Z6 455 aaPredicted RBP12.55□□□□□ -0.4
COPA-205ENST00000541366 GAREM1Q9H706 876 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 CCSER2Q9H7U1 834 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 DNAJC17Q9NVM6 304 aaKnown RBP12.55□□□□□ -0.4
COPA-205ENST00000541366 SUSD2Q9UGT4 822 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 BTBD3Q9Y2F9 522 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 SH3BP1Q9Y3L3 701 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 CFAP46Q8IYW2 2715 aa12.55□□□□□ -0.4
COPA-205ENST00000541366 TENM4Q6N022 2769 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 MEI4A8MW99 385 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 CILPO75339 1184 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 GNSP15586 552 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 WARSP23381 471 aaKnown RBP12.54□□□□□ -0.4
COPA-205ENST00000541366 ABCD1P33897 745 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 PPP3CCP48454 512 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 PGFP49763 221 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 NUMA1Q14980 2115 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 CCDC157Q569K6 752 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 WDR45BQ5MNZ6 344 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 SYCP2LQ5T4T6 812 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 GRAMD4Q6IC98 578 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 DDX42Q86XP3 938 aaKnown RBP eCLIP12.54□□□□□ -0.4
COPA-205ENST00000541366 RASSF8Q8NHQ8 419 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 SCAMP5Q8TAC9 235 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 BAHD1Q8TBE0 780 aaPredicted RBP12.54□□□□□ -0.4
COPA-205ENST00000541366 KCNV2Q8TDN2 545 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 FBXO32Q969P5 355 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 TOE1Q96GM8 510 aaKnown RBP12.54□□□□□ -0.4
COPA-205ENST00000541366 AK8Q96MA6 479 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 DCBLD2Q96PD2 775 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 SLITRK1Q96PX8 696 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 MMS19Q96T76 1030 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 GPR174Q9BXC1 333 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 MRPL44Q9H9J2 332 aaKnown RBP12.54□□□□□ -0.4
COPA-205ENST00000541366 TM7SF3Q9NS93 570 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 INTS13Q9NVM9 706 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 KIAA1522Q9P206 1035 aaPredicted RBP12.54□□□□□ -0.4
COPA-205ENST00000541366 DKK4Q9UBT3 224 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 STARD13Q9Y3M8 1113 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 SLCO1B1Q9Y6L6 691 aa12.54□□□□□ -0.4
COPA-205ENST00000541366 ZNF462Q96JM2 2506 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms