RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 NEU2Q9Y3R4 380 aa14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 KRT36O76013 467 aa14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 IVDP26440 423 aa14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 SNX17Q15036 470 aa14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 ARHGAP22Q7Z5H3 698 aa14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 LRRC37BQ96QE4 947 aa14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 TMEM121Q9BTD3 319 aa14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 ZWILCHQ9H900 591 aa14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 PIN4Q9Y237 131 aaKnown RBP14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 CHKBQ9Y259 395 aa14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 Q9Y3F1 56 aa14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 CDH16O75309 829 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 ATP6V1C1P21283 382 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 CYP2C18P33260 490 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 SETDB1Q15047 1291 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 RCN1Q15293 331 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 MAPK6Q16659 721 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 AMHR2Q16671 573 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 LRRC36Q1X8D7 754 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 TCTN1Q2MV58 587 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 KCNT1Q5JUK3 1230 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 CYP4A22Q5TCH4 519 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 TDRD10Q5VZ19 366 aaKnown RBP14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 CATSPER4Q7RTX7 472 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 DEFB128Q7Z7B8 93 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 MFN1Q8IWA4 741 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 MCEEQ96PE7 176 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 NTPCRQ9BSD7 190 aaKnown RBP14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 PRDM5Q9NQX1 630 aaPredicted RBP14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 AGO2Q9UKV8 859 aaKnown RBP14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 F8VP50 259 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 MTA2O94776 668 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 PROSCO94903 275 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 OAS1P00973 400 aaKnown RBP14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 HOXA11P31270 313 aaPredicted RBP14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 TLE2Q04725 743 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 PTK6Q13882 451 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 PKN2Q16513 984 aaKnown RBP14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 LRRC23Q53EV4 343 aaPredicted RBP14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 C12orf56Q8IXR9 622 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 PCSK9Q8NBP7 692 aaKnown RBP14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 CKAP2Q8WWK9 683 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 SCG3Q8WXD2 468 aaKnown RBP14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 NXF3Q9H4D5 531 aaKnown RBP14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 RHBDL2Q9NX52 303 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 RBAKQ9NYW8 714 aaPredicted RBP14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 LRRC42Q9Y546 428 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 SCN5AQ14524 2016 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 UNGP13051 313 aaPredicted RBP14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 CPA2P48052 419 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 IL9RQ01113 521 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 ORC1Q13415 861 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 TSNAXIP1Q2TAA8 658 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 ZNF568Q3ZCX4 644 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 MFSD5Q6N075 450 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 MFSD7Q6UXD7 560 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 RBBP8NLQ8NC74 664 aaPredicted RBP14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 LRRC8CQ8TDW0 803 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 MAIP1Q8WWC4 291 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 MSTO1Q9BUK6 570 aa14.94□□□□□ -0.02
SFSWAP-210ENST00000541286 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 C2orf71A6NGG8 1288 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 NVLO15381 856 aaKnown RBP14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 MGEA5O60502 916 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 TSPAN1O60635 241 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 CXCL8P10145 99 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 CACNA2D1P54289 1103 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 PDIA2Q13087 525 aaKnown RBP14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 SLC5A9Q2M3M2 681 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 TAF1BQ53T94 588 aaPredicted RBP14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 TXNRD3NBQ6F5E7 133 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 RAB3IPQ96QF0 476 aaPredicted RBP14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 CYTH2Q99418 400 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 CD19P15391 556 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 MAMLD1Q13495 774 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 CUL3Q13618 768 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 MXD4Q14582 209 aaPredicted RBP14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 LRRC26Q2I0M4 334 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 HHATQ5VTY9 493 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 SNX30Q5VWJ9 437 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 DRAXINQ8NBI3 349 aaPredicted RBP14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 OR5B17Q8NGF7 314 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 ITFG2Q969R8 447 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 TRABDQ9H4I3 376 aa14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.93□□□□□ -0.02
SFSWAP-210ENST00000541286 SPATA31D3P0C874 917 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 SYN1P17600 705 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 CCNFP41002 786 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 MRPS35P82673 323 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 ATF7IP2Q5U623 682 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 SPATA31D4Q6ZUB0 917 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 SERINC5Q86VE9 423 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 NRG4Q8WWG1 115 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 RBM41Q96IZ5 413 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 ACO2Q99798 780 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 KATNAL1Q9BW62 490 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 APOBEC3GQ9HC16 384 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 HCSTQ9UBK5 93 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 SCOCQ9UIL1 159 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 CFAP69A5D8W1 941 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms