RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 FAM3CQ92520 227 aa13.81□□□□□ -0.2
LTBR-208ENST00000541005 ATP2A3Q93084 1043 aa13.81□□□□□ -0.2
LTBR-208ENST00000541005 IER2Q9BTL4 223 aa13.81□□□□□ -0.2
LTBR-208ENST00000541005 CCSER2Q9H7U1 834 aa13.81□□□□□ -0.2
LTBR-208ENST00000541005 SIX2Q9NPC8 291 aa13.81□□□□□ -0.2
LTBR-208ENST00000541005 UBE2TQ9NPD8 197 aaPredicted RBP13.81□□□□□ -0.2
LTBR-208ENST00000541005 OSER1Q9NX31 292 aa13.81□□□□□ -0.2
LTBR-208ENST00000541005 CLIC5Q9NZA1 410 aa13.81□□□□□ -0.2
LTBR-208ENST00000541005 HESX1Q9UBX0 185 aa13.81□□□□□ -0.2
LTBR-208ENST00000541005 MTF2Q9Y483 593 aaPredicted RBP13.81□□□□□ -0.2
LTBR-208ENST00000541005 CPQQ9Y646 472 aa13.81□□□□□ -0.2
LTBR-208ENST00000541005 SPAG17Q6Q759 2223 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 OTOL1A6NHN0 477 aaPredicted RBP13.8□□□□□ -0.2
LTBR-208ENST00000541005 FAM170BA6NMN3 283 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 NCAM2O15394 837 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 DCNP07585 359 aaKnown RBP13.8□□□□□ -0.2
LTBR-208ENST00000541005 MBL2P11226 248 aaPredicted RBP13.8□□□□□ -0.2
LTBR-208ENST00000541005 ARSAP15289 507 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 CD72P21854 359 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 SOX9P48436 509 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 MFAP3P55082 362 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 TRIM68Q6AZZ1 485 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 PM20D1Q6GTS8 502 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 DPY19L2P1Q6NXN4 242 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 SCD5Q86SK9 330 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 SCML4Q8N228 414 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 CPA6Q8N4T0 437 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 KCTD13Q8WZ19 329 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 SHC3Q92529 594 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 CHFRQ96EP1 664 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 IRF2BPLQ9H1B7 796 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 EBF3Q9H4W6 596 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 NMUR1Q9HB89 426 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.8□□□□□ -0.2
LTBR-208ENST00000541005 DUS2Q9NX74 493 aaKnown RBP13.8□□□□□ -0.2
LTBR-208ENST00000541005 WNT6Q9Y6F9 365 aa13.8□□□□□ -0.2
LTBR-208ENST00000541005 A0A1W2PQH9 124 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 E2F8A0AVK6 867 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 BECN2A8MW95 431 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 TULP2O00295 520 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 SLC9A3R1O14745 358 aaPredicted RBP13.79□□□□□ -0.2
LTBR-208ENST00000541005 BRD2P25440 801 aaKnown RBP13.79□□□□□ -0.2
LTBR-208ENST00000541005 PLA2G5P39877 138 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 IFNAR2P48551 515 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 MYL5Q02045 173 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 TYRO3Q06418 890 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 HSP90AA4PQ58FG1 418 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 GJB7Q6PEY0 223 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 TXNDC11Q6PKC3 985 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 MAMSTRQ6ZN01 415 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 BHLHA9Q7RTU4 235 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 ARHGAP18Q8N392 663 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 SLC35F5Q8WV83 523 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 CDK5RAP1Q96SZ6 601 aaKnown RBP13.79□□□□□ -0.2
LTBR-208ENST00000541005 CHRDQ9H2X0 955 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 ECT2Q9H8V3 914 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 SMPD4Q9NXE4 827 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 CFAP97Q9P2B7 532 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 FAM186AA6NE01 2351 aa13.79□□□□□ -0.2
LTBR-208ENST00000541005 RIF1Q5UIP0 2472 aaKnown RBP13.78□□□□□ -0.2
LTBR-208ENST00000541005 M0QYV0 167 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 NFATC1O95644 943 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 ZBED1O96006 694 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 CHRNB1P11230 501 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 KRT5P13647 590 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 ZNF18P17022 549 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 ATP5C1P36542 298 aaKnown RBP13.78□□□□□ -0.2
LTBR-208ENST00000541005 RPL34P49207 117 aaKnown RBP13.78□□□□□ -0.2
LTBR-208ENST00000541005 TKTL1P51854 596 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 AMPD2Q01433 879 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 APBA1Q02410 837 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 NHLH1Q02575 133 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 KRT31Q15323 416 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 KLHL40Q2TBA0 621 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 CAVIN1Q6NZI2 390 aaKnown RBP13.78□□□□□ -0.2
LTBR-208ENST00000541005 TADA2BQ86TJ2 420 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 UBA3Q8TBC4 463 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 SECISBP2LQ93073 1101 aaKnown RBP13.78□□□□□ -0.2
LTBR-208ENST00000541005 OTUB2Q96DC9 234 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 KLF16Q9BXK1 252 aaPredicted RBP13.78□□□□□ -0.2
LTBR-208ENST00000541005 HSD3B7Q9H2F3 369 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 LRRC4Q9HBW1 653 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 CNGB3Q9NQW8 809 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 TBC1D14Q9P2M4 693 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 NAGPAQ9UK23 515 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 NDRG2Q9UN36 371 aaKnown RBP13.78□□□□□ -0.2
LTBR-208ENST00000541005 EML5Q05BV3 1969 aa13.78□□□□□ -0.2
LTBR-208ENST00000541005 TRDMT1O14717 391 aaKnown RBP13.77□□□□□ -0.21
LTBR-208ENST00000541005 GABBR2O75899 941 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 RALAP11233 206 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 RARGP13631 454 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 PTMSP20962 102 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 GNA15P30679 374 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 GJA4P35212 333 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 ADIGQ0VDE8 80 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 KCNMA1Q12791 1236 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 CCINQ13939 588 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 LRRC32Q14392 662 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 NCAPHQ15003 741 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 ANGPT1Q15389 498 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms