RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 RFC2P35250 354 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 DAOAP59103 153 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 YWHAZP63104 245 aaKnown RBP25.66■■□□□ 1.7
TTC3-225ENST00000540756 MRPL58Q14197 206 aaKnown RBP25.66■■□□□ 1.7
TTC3-225ENST00000540756 CTXN3Q4LDR2 81 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 TFDP3Q5H9I0 405 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 FAM43BQ6ZT52 329 aaPredicted RBP25.66■■□□□ 1.7
TTC3-225ENST00000540756 ARCQ7LC44 396 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 BHLHA9Q7RTU4 235 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 KCTD6Q8NC69 237 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 TOP1MTQ969P6 601 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 DMAP1Q9NPF5 467 aaPredicted RBP25.66■■□□□ 1.7
TTC3-225ENST00000540756 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.66■■□□□ 1.7
TTC3-225ENST00000540756 NAALADL1Q9UQQ1 740 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 SF3B1O75533 1304 aaKnown RBP eCLIP25.66■■□□□ 1.73e-7■■■■■ 46.9
TTC3-225ENST00000540756 PRPSAP2O60256 369 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 MATKP42679 507 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 PTPN9P43378 593 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 MAPRE1Q15691 268 aaKnown RBP25.66■■□□□ 1.7
TTC3-225ENST00000540756 ZC3H12AQ5D1E8 599 aaKnown RBP25.66■■□□□ 1.7
TTC3-225ENST00000540756 OTUD1Q5VV17 481 aaPredicted RBP25.66■■□□□ 1.7
TTC3-225ENST00000540756 MAATS1Q7Z4T9 603 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 CENPIQ92674 756 aaPredicted RBP25.66■■□□□ 1.7
TTC3-225ENST00000540756 ZBTB9Q96C00 473 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 TMEM175Q9BSA9 504 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 TRIM31Q9BZY9 425 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 LRRC19Q9H756 370 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 MMRN1Q13201 1228 aa25.65■■□□□ 1.7
TTC3-225ENST00000540756 CA9Q16790 459 aa25.65■■□□□ 1.7
TTC3-225ENST00000540756 IFT20Q8IY31 132 aa25.65■■□□□ 1.7
TTC3-225ENST00000540756 TTC9BQ8N6N2 239 aa25.65■■□□□ 1.7
TTC3-225ENST00000540756 C12orf50Q8NA57 414 aaPredicted RBP25.65■■□□□ 1.7
TTC3-225ENST00000540756 HAUS1Q96CS2 278 aa25.65■■□□□ 1.7
TTC3-225ENST00000540756 UBXN6Q9BZV1 441 aa25.65■■□□□ 1.7
TTC3-225ENST00000540756 DCLK3Q9C098 648 aa25.65■■□□□ 1.7
TTC3-225ENST00000540756 SAE1Q9UBE0 346 aaPredicted RBP25.65■■□□□ 1.7
TTC3-225ENST00000540756 PCYOX1Q9UHG3 505 aa25.65■■□□□ 1.7
TTC3-225ENST00000540756 NFU1Q9UMS0 254 aa25.65■■□□□ 1.7
TTC3-225ENST00000540756 BHMG1C9JSJ3 638 aaPredicted RBP25.64■■□□□ 1.7
TTC3-225ENST00000540756 SASH3O75995 380 aa25.64■■□□□ 1.7
TTC3-225ENST00000540756 GRIK1P39086 918 aa25.64■■□□□ 1.7
TTC3-225ENST00000540756 GPR15P49685 360 aa25.64■■□□□ 1.7
TTC3-225ENST00000540756 ARPP19P56211 112 aa25.64■■□□□ 1.7
TTC3-225ENST00000540756 DYNLT1P63172 113 aa25.64■■□□□ 1.7
TTC3-225ENST00000540756 SDHAF4Q5VUM1 108 aa25.64■■□□□ 1.7
TTC3-225ENST00000540756 MFSD5Q6N075 450 aa25.64■■□□□ 1.7
TTC3-225ENST00000540756 JAMLQ86YT9 394 aa25.64■■□□□ 1.7
TTC3-225ENST00000540756 CCDC105Q8IYK2 499 aa25.64■■□□□ 1.7
TTC3-225ENST00000540756 CNGB3Q9NQW8 809 aa25.64■■□□□ 1.7
TTC3-225ENST00000540756 ABHD14A-ACY1A0A1B0GW23 586 aa25.64■■□□□ 1.69
TTC3-225ENST00000540756 ERLIN1O75477 346 aa25.64■■□□□ 1.69
TTC3-225ENST00000540756 DAB1O75553 588 aa25.64■■□□□ 1.69
TTC3-225ENST00000540756 ZBED1O96006 694 aa25.64■■□□□ 1.69
TTC3-225ENST00000540756 MCM3P25205 808 aa25.64■■□□□ 1.69
TTC3-225ENST00000540756 IFRD2Q12894 506 aaPredicted RBP25.64■■□□□ 1.69
TTC3-225ENST00000540756 C4orf50Q6ZRC1 276 aa25.64■■□□□ 1.69
TTC3-225ENST00000540756 VN1R3Q9BXE9 311 aa25.64■■□□□ 1.69
TTC3-225ENST00000540756 DPH5Q9H2P9 285 aa25.64■■□□□ 1.69
TTC3-225ENST00000540756 PATJQ8NI35 1801 aa25.64■■□□□ 1.69
TTC3-225ENST00000540756 SYNJ2BP-COX16A0A087WUM0 186 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 DAPK3O43293 454 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 CAPN15O75808 1086 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 ALDH7A1P49419 539 aaKnown RBP25.63■■□□□ 1.69
TTC3-225ENST00000540756 SULT1E1P49888 294 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 CDH6P55285 790 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 COPS2P61201 443 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 WDR5P61964 334 aaKnown RBP25.63■■□□□ 1.69
TTC3-225ENST00000540756 PPP2R5EQ16537 467 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 PRSS55Q6UWB4 352 aaPredicted RBP25.63■■□□□ 1.69
TTC3-225ENST00000540756 OTOP2Q7RTS6 562 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 SCN4BQ8IWT1 228 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 ATAD1Q8NBU5 361 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 ADAM32Q8TC27 787 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 SLC2A13Q96QE2 648 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 SNRNP25Q9BV90 132 aaKnown RBP25.63■■□□□ 1.69
TTC3-225ENST00000540756 CALN1Q9BXU9 219 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.63■■□□□ 1.69
TTC3-225ENST00000540756 COX16Q9P0S2 106 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 FBXO21O94952 628 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 ARSEP51690 589 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 TAZQ16635 292 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 SLC25A52Q3SY17 297 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 CCDC185Q8N715 623 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 AENQ8WTP8 325 aaKnown RBP25.63■■□□□ 1.69
TTC3-225ENST00000540756 EDEM1Q92611 657 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 POPDC2Q9HBU9 364 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 TMPRSS4Q9NRS4 437 aa25.63■■□□□ 1.69
TTC3-225ENST00000540756 TJP3O95049 919 aa25.62■■□□□ 1.69
TTC3-225ENST00000540756 FAM153BP0C7A2 387 aa25.62■■□□□ 1.69
TTC3-225ENST00000540756 ECHS1P30084 290 aa25.62■■□□□ 1.69
TTC3-225ENST00000540756 PTPN7P35236 360 aa25.62■■□□□ 1.69
TTC3-225ENST00000540756 CETN2P41208 172 aa25.62■■□□□ 1.69
TTC3-225ENST00000540756 PGFP49763 221 aa25.62■■□□□ 1.69
TTC3-225ENST00000540756 DDR2Q16832 855 aa25.62■■□□□ 1.69
TTC3-225ENST00000540756 FAM153CQ494X1 144 aa25.62■■□□□ 1.69
TTC3-225ENST00000540756 DCP1BQ8IZD4 617 aaKnown RBP25.62■■□□□ 1.69
TTC3-225ENST00000540756 RUBCNQ92622 972 aa25.62■■□□□ 1.69
TTC3-225ENST00000540756 ZNF689Q96CS4 500 aaPredicted RBP25.62■■□□□ 1.69
TTC3-225ENST00000540756 FUT8Q9BYC5 575 aa25.62■■□□□ 1.69
TTC3-225ENST00000540756 MCOLN1Q9GZU1 580 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms