RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 ELF2Q15723 593 aa14.92□□□□□ -0.02
CYB561A3-216ENST00000540755 SLC39A12Q504Y0 691 aa14.92□□□□□ -0.02
CYB561A3-216ENST00000540755 RTP2Q5QGT7 225 aa14.92□□□□□ -0.02
CYB561A3-216ENST00000540755 KCNT2Q6UVM3 1135 aa14.92□□□□□ -0.02
CYB561A3-216ENST00000540755 SCML4Q8N228 414 aa14.92□□□□□ -0.02
CYB561A3-216ENST00000540755 ARFGAP1Q8N6T3 406 aa14.92□□□□□ -0.02
CYB561A3-216ENST00000540755 GPR161Q8N6U8 529 aaKnown RBP14.92□□□□□ -0.02
CYB561A3-216ENST00000540755 EXD1Q8NHP7 514 aa14.92□□□□□ -0.02
CYB561A3-216ENST00000540755 ADAMTS19Q8TE59 1207 aa14.92□□□□□ -0.02
CYB561A3-216ENST00000540755 ZNF558Q96NG5 402 aa14.92□□□□□ -0.02
CYB561A3-216ENST00000540755 NCAPGQ9BPX3 1015 aa14.92□□□□□ -0.02
CYB561A3-216ENST00000540755 DDX56Q9NY93 547 aaKnown RBP14.92□□□□□ -0.02
CYB561A3-216ENST00000540755 DAB1O75553 588 aa14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 GJB5O95377 273 aa14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 KRT7P08729 469 aa14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 OR4Q2P0C623 313 aa14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 DAOAP59103 153 aa14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 TFF2Q03403 129 aa14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 SMARCB1Q12824 385 aa14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 LONRF2Q1L5Z9 754 aa14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 USP41Q3LFD5 358 aa14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 CCDC14Q49A88 953 aa14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 SPOUT1Q5T280 376 aaKnown RBP14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 FAM117BQ6P1L5 589 aa14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 SLC39A11Q8N1S5 342 aa14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 RHOBTB2Q9BYZ6 727 aa14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 RBM12Q9NTZ6 932 aaKnown RBP14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 MRPL42Q9Y6G3 142 aaKnown RBP14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 MYO16Q9Y6X6 1858 aa14.91□□□□□ -0.02
CYB561A3-216ENST00000540755 TNFRSF10AO00220 468 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 ZRANB2O95218 330 aaKnown RBP eCLIP14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 TCF4P15884 667 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 MAGEA11P43364 429 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 GPR17Q13304 367 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 AADACL2Q6P093 401 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 VSTM1Q6UX27 236 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 GPRIN1Q7Z2K8 1008 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 SLC13A5Q86YT5 568 aaPredicted RBP14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 COLGALT1Q8NBJ5 622 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 IRGQQ8WZA9 623 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 TSC1Q92574 1164 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 CENPIQ92674 756 aaPredicted RBP14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 RBM41Q96IZ5 413 aaKnown RBP14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 B3GALT6Q96L58 329 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 CFAP57Q96MR6 1250 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 YME1L1Q96TA2 773 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 C11orf84Q9BUA3 381 aaPredicted RBP14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 DDX23Q9BUQ8 820 aaKnown RBP14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 ULBP1Q9BZM6 244 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 CHST7Q9NS84 486 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 ARGLU1Q9NWB6 273 aaPredicted RBP14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 PCDHB5Q9Y5E4 795 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 BACE2Q9Y5Z0 518 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 USP3Q9Y6I4 520 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 PLXNA3P51805 1871 aa14.9□□□□□ -0.02
CYB561A3-216ENST00000540755 KRIT1O00522 736 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 TRIM66O15016 1216 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 SOD2P04179 222 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 CYP2F1P24903 491 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 MIPP30301 263 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 GRIK1P39086 918 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 MATKP42679 507 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 NDUFV1P49821 464 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 CDR1P51861 262 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 YWHAZP63104 245 aaKnown RBP14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 HTRA4P83105 476 aaPredicted RBP14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 PPP2R5EQ16537 467 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 C15orf59Q2T9L4 293 aaPredicted RBP14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 PM20D1Q6GTS8 502 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 TAS1R1Q7RTX1 841 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 RCOR2Q8IZ40 523 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 SPPL2BQ8TCT7 592 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 GDPD5Q8WTR4 605 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 C2orf15Q8WU43 125 aaKnown RBP14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 PIK3R5Q8WYR1 880 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 TMEM169Q96HH4 297 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 C8orf48Q96LL4 319 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 SLC2A13Q96QE2 648 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 HERC2P3Q9BVR0 1158 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 VN1R3Q9BXE9 311 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 POPDC2Q9HBU9 364 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 ABI2Q9NYB9 513 aaPredicted RBP14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 MTRRQ9UBK8 725 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 USP18Q9UMW8 372 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 TCF20Q9UGU0 1960 aaKnown RBP14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 GREB1Q4ZG55 1949 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 GOLGA6L10A0A0M3HER8 536 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 LINC01553A4QN01 128 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 FSCN2O14926 492 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 TRUB2O95900 331 aaKnown RBP14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 ZBED1O96006 694 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 KRT1P04264 644 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 BMP1P13497 986 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 IL1R2P27930 398 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 NOS2P35228 1153 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 PTPN7P35236 360 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 GJC1P36383 396 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 CETN2P41208 172 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 KCNQ1P51787 676 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms