RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 SGSM1Q2NKQ1 1148 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 RNF43Q68DV7 783 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 TMEM92Q6UXU6 159 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 TTC30AQ86WT1 665 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 IL17RCQ8NAC3 791 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 TXNDC5Q8NBS9 432 aaKnown RBP14.97□□□□□ -0.01
SNHG1-213ENST00000540725 SPRYD3Q8NCJ5 442 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 ZMIZ2Q8NF64 920 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 TMC2Q8TDI7 906 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 SMOQ99835 787 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 EDEM2Q9BV94 578 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 COMMD8Q9NX08 183 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 HMGXB4Q9UGU5 601 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 SH3BP1Q9Y3L3 701 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 A0A0A0MRY4 1105 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 A0A1B0GVL5 298 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 SGK1O00141 431 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 ALDH1A2O94788 518 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 RPN1P04843 607 aaKnown RBP14.96□□□□□ -0.02
SNHG1-213ENST00000540725 BCKDHBP21953 392 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 GRIA2P42262 883 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 KIR2DL1P43626 348 aaPredicted RBP14.96□□□□□ -0.02
SNHG1-213ENST00000540725 NDST1P52848 882 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 GAD2Q05329 585 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 HSF5Q4G112 596 aaPredicted RBP14.96□□□□□ -0.02
SNHG1-213ENST00000540725 EMC10Q5UCC4 262 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 CEP135Q66GS9 1140 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 SV2AQ7L0J3 742 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 CRYBG2Q8N1P7 616 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 SLC2A14Q8TDB8 520 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 TAF4BQ92750 862 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 NACA2Q9H009 215 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 FAM49BQ9NUQ9 324 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 USP25Q9UHP3 1055 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 CACNA1EQ15878 2313 aa14.96□□□□□ -0.02
SNHG1-213ENST00000540725 HOXC11O43248 304 aaPredicted RBP14.95□□□□□ -0.02
SNHG1-213ENST00000540725 BEST1O76090 585 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 ASS1P00966 412 aaKnown RBP14.95□□□□□ -0.02
SNHG1-213ENST00000540725 HLA-DRAP01903 254 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 MYL1P05976 194 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 IRF1P10914 325 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 CMA1P23946 247 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 PIK3CAP42336 1068 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 TNFRSF4P43489 277 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 ASPAP45381 313 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 MAP3K7CLP57077 242 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 EOGTQ5NDL2 527 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 C1orf220Q5T0J3 134 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 N4BP2L1Q5TBK1 243 aaPredicted RBP14.95□□□□□ -0.02
SNHG1-213ENST00000540725 BTBD8Q5XKL5 378 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 SPOPLQ6IQ16 392 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 CYP2U1Q7Z449 544 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 UNC93AQ86WB7 457 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 BBS7Q8IWZ6 715 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 ETFBKMTQ8IXQ9 262 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 PHTF2Q8N3S3 785 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 OLIG1Q8TAK6 271 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 WBP2Q969T9 261 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 DUSP9Q99956 384 aaKnown RBP14.95□□□□□ -0.02
SNHG1-213ENST00000540725 LSM14BQ9BX40 385 aaKnown RBP14.95□□□□□ -0.02
SNHG1-213ENST00000540725 FBXO44Q9H4M3 255 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 CSNK1G1Q9HCP0 422 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 POLMQ9NP87 494 aaPredicted RBP14.95□□□□□ -0.02
SNHG1-213ENST00000540725 ZDHHC4Q9NPG8 344 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 FRMD4BQ9Y2L6 1034 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 CHD6Q8TD26 2715 aa14.95□□□□□ -0.02
SNHG1-213ENST00000540725 PCNX2A6NKB5 2137 aa14.94□□□□□ -0.02
SNHG1-213ENST00000540725 LNP1A1A4G5 178 aa14.94□□□□□ -0.02
SNHG1-213ENST00000540725 IKBKBO14920 756 aa14.94□□□□□ -0.02
SNHG1-213ENST00000540725 CALUO43852 315 aaPredicted RBP14.94□□□□□ -0.02
SNHG1-213ENST00000540725 TLR5O60602 858 aa14.94□□□□□ -0.02
SNHG1-213ENST00000540725 TULP3O75386 442 aa14.94□□□□□ -0.02
SNHG1-213ENST00000540725 PGFP49763 221 aa14.94□□□□□ -0.02
SNHG1-213ENST00000540725 NAT16Q8N8M0 369 aa14.94□□□□□ -0.02
SNHG1-213ENST00000540725 C12orf29Q8N999 325 aa14.94□□□□□ -0.02
SNHG1-213ENST00000540725 WHAMMQ8TF30 809 aa14.94□□□□□ -0.02
SNHG1-213ENST00000540725 RLN3Q8WXF3 142 aa14.94□□□□□ -0.02
SNHG1-213ENST00000540725 TLR8Q9NR97 1041 aaKnown RBP14.94□□□□□ -0.02
SNHG1-213ENST00000540725 SPHK2Q9NRA0 654 aa14.94□□□□□ -0.02
SNHG1-213ENST00000540725 DEC1Q9P2X7 70 aa14.94□□□□□ -0.02
SNHG1-213ENST00000540725 TRAF3IP3Q9Y228 551 aa14.94□□□□□ -0.02
SNHG1-213ENST00000540725 HPSEQ9Y251 543 aa14.94□□□□□ -0.02
SNHG1-213ENST00000540725 IGF2RP11717 2491 aa14.94□□□□□ -0.02
SNHG1-213ENST00000540725 FRYQ5TBA9 3013 aa14.93□□□□□ -0.02
SNHG1-213ENST00000540725 TBC1D3BA6NDS4 549 aa14.93□□□□□ -0.02
SNHG1-213ENST00000540725 C4orf47A7E2U8 309 aa14.93□□□□□ -0.02
SNHG1-213ENST00000540725 ADAM23O75077 832 aa14.93□□□□□ -0.02
SNHG1-213ENST00000540725 KCNK5O95279 499 aa14.93□□□□□ -0.02
SNHG1-213ENST00000540725 FAM200BP0CF97 657 aa14.93□□□□□ -0.02
SNHG1-213ENST00000540725 TRIM21P19474 475 aaKnown RBP14.93□□□□□ -0.02
SNHG1-213ENST00000540725 ADORA2BP29275 332 aa14.93□□□□□ -0.02
SNHG1-213ENST00000540725 PMLP29590 882 aa14.93□□□□□ -0.02
SNHG1-213ENST00000540725 P2RY2P41231 377 aa14.93□□□□□ -0.02
SNHG1-213ENST00000540725 DHPSP49366 369 aaPredicted RBP14.93□□□□□ -0.02
SNHG1-213ENST00000540725 VAMP7P51809 220 aa14.93□□□□□ -0.02
SNHG1-213ENST00000540725 INCA1Q0VD86 236 aa14.93□□□□□ -0.02
SNHG1-213ENST00000540725 ANO4Q32M45 955 aa14.93□□□□□ -0.02
SNHG1-213ENST00000540725 GPRIN1Q7Z2K8 1008 aa14.93□□□□□ -0.02
SNHG1-213ENST00000540725 TMEM25Q86YD3 366 aa14.93□□□□□ -0.02
SNHG1-213ENST00000540725 HMGB4Q8WW32 186 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms