RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 HMGA1P17096 107 aaKnown RBP19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 YWHAQP27348 245 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 EPHB3P54753 998 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 KCNC3Q14003 757 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 TCEAL1Q15170 157 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 SLC26A9Q7LBE3 791 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 RHOT2Q8IXI1 618 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 HDAC7Q8WUI4 952 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 CDCA3Q99618 268 aaPredicted RBP19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 SELENOOQ9BVL4 669 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 TSGA10Q9BZW7 698 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 FBXO44Q9H4M3 255 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 GUCA1BQ9UMX6 200 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 MAGED2Q9UNF1 606 aaPredicted RBP19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 SCINQ9Y6U3 715 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 C5orf42Q9H799 3197 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 SIGLEC16A6NMB1 481 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 YJEFN3A6XGL0 299 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 E7ENQ6 273 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 RFPL2O75678 378 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 GRAP2O75791 330 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 LRG1P02750 347 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 CSH1P0DML2 217 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 CSH2P0DML3 217 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 KRT3P12035 628 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 SCNN1AP37088 669 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 RPL7AP62424 266 aaKnown RBP19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 PLD1Q13393 1074 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 COL19A1Q14993 1142 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 VEPH1Q14D04 833 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 ARHGAP29Q52LW3 1261 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 PPM1LQ5SGD2 360 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 HFE2Q6ZVN8 426 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 RTL10Q7L3V2 364 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 ZSCAN30Q86W11 494 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 JOSD2Q8TAC2 188 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 ADAMTS19Q8TE59 1207 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 PPP2R3CQ969Q6 453 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 PSMG2Q969U7 264 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 TTLL2Q9BWV7 592 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 TRIM7Q9C029 511 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 MRPL47Q9HD33 250 aaKnown RBP19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 COMMD8Q9NX08 183 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 UVRAGQ9P2Y5 699 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 TMEM59LQ9UK28 342 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 SCML2Q9UQR0 700 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 PAXBP1Q9Y5B6 917 aa19.85■□□□□ 0.77
TNFRSF1A-213ENST00000540022 MACROD2A1Z1Q3 448 aa19.84■□□□□ 0.77
TNFRSF1A-213ENST00000540022 BUB1O43683 1085 aa19.84■□□□□ 0.77
TNFRSF1A-213ENST00000540022 PGFP49763 221 aa19.84■□□□□ 0.77
TNFRSF1A-213ENST00000540022 RNASE9P60153 205 aaKnown RBP19.84■□□□□ 0.77
TNFRSF1A-213ENST00000540022 EFHC1Q5JVL4 640 aa19.84■□□□□ 0.77
TNFRSF1A-213ENST00000540022 DNAJB7Q7Z6W7 309 aaPredicted RBP19.84■□□□□ 0.77
TNFRSF1A-213ENST00000540022 EMC1Q8N766 993 aa19.84■□□□□ 0.77
TNFRSF1A-213ENST00000540022 ZNF564Q8TBZ8 553 aaPredicted RBP19.84■□□□□ 0.77
TNFRSF1A-213ENST00000540022 IRGQQ8WZA9 623 aa19.84■□□□□ 0.77
TNFRSF1A-213ENST00000540022 MCEEQ96PE7 176 aa19.84■□□□□ 0.77
TNFRSF1A-213ENST00000540022 BDP1A6H8Y1 2624 aa19.84■□□□□ 0.77
TNFRSF1A-213ENST00000540022 PLXNA3P51805 1871 aa19.84■□□□□ 0.77
TNFRSF1A-213ENST00000540022 TMEM191CA6NGB0 347 aa19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 SART1O43290 800 aaKnown RBP19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 CCP110O43303 1012 aa19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 MTA2O94776 668 aa19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 RFC1P35251 1148 aaPredicted RBP19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 FLT3P36888 993 aa19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 NOP2P46087 812 aaKnown RBP19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 DLX2Q07687 328 aaPredicted RBP19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 TAF10Q12962 218 aa19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 TRNP1Q6NT89 227 aa19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 SCD5Q86SK9 330 aa19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 EFHBQ8N7U6 833 aa19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 FBXO32Q969P5 355 aa19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 FAM149B1Q96BN6 582 aa19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 MYRFLQ96LU7 910 aa19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 ASNSD1Q9NWL6 643 aa19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 GMIPQ9P107 970 aa19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 DPP7Q9UHL4 492 aa19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 ASB3Q9Y575 518 aa19.83■□□□□ 0.77
TNFRSF1A-213ENST00000540022 CCL16O15467 120 aa19.82■□□□□ 0.76
TNFRSF1A-213ENST00000540022 LTFP02788 710 aa19.82■□□□□ 0.76
TNFRSF1A-213ENST00000540022 KCNA5P22460 613 aa19.82■□□□□ 0.76
TNFRSF1A-213ENST00000540022 HOXA9P31269 272 aa19.82■□□□□ 0.76
TNFRSF1A-213ENST00000540022 HADHBP55084 474 aaKnown RBP19.82■□□□□ 0.76
TNFRSF1A-213ENST00000540022 YWHAZP63104 245 aaKnown RBP19.82■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ADAM15Q13444 863 aa19.82■□□□□ 0.76
TNFRSF1A-213ENST00000540022 TAF12Q16514 161 aa19.82■□□□□ 0.76
TNFRSF1A-213ENST00000540022 DCUN1D2Q6PH85 259 aa19.82■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ITIH5Q86UX2 942 aa19.82■□□□□ 0.76
TNFRSF1A-213ENST00000540022 PABPC5Q96DU9 382 aaKnown RBP19.82■□□□□ 0.76
TNFRSF1A-213ENST00000540022 TRMT2BQ96GJ1 504 aaKnown RBP19.82■□□□□ 0.76
TNFRSF1A-213ENST00000540022 BTBD6Q96KE9 485 aa19.82■□□□□ 0.76
TNFRSF1A-213ENST00000540022 IRX2Q9BZI1 471 aaPredicted RBP19.82■□□□□ 0.76
TNFRSF1A-213ENST00000540022 NMUR1Q9HB89 426 aa19.82■□□□□ 0.76
TNFRSF1A-213ENST00000540022 A0A1W2PQH9 124 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 HSF2BPO75031 334 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 MOCS3O95396 460 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 FYNP06241 537 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 GLI1P08151 1106 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 HNRNPA1P09651 372 aaKnown RBP eCLIP19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 LTBRP36941 435 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms