RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 CC2D1AQ6P1N0 951 aaPredicted RBP19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 TXNDC11Q6PKC3 985 aa19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 ZNF852Q6ZMS4 543 aa19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 ENOSF1Q7L5Y1 443 aa19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 SHC3Q92529 594 aa19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 NDRG1Q92597 394 aaKnown RBP19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 WBP2Q969T9 261 aa19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 CHFRQ96EP1 664 aa19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 DNAJC12Q9UKB3 198 aa19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 NUDT5Q9UKK9 219 aa19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 SPECC1L-ADORA2AF8WAN1 911 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 PLA2G4AP47712 749 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 TKTL1P51854 596 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 MLLT6P55198 1093 aaPredicted RBP19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 SLC8A3P57103 927 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 RUNX3Q13761 415 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 EML3Q32P44 896 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 ITPRIPL2Q3MIP1 535 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 BHLHA9Q7RTU4 235 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 AOPEPQ8N6M6 819 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 SLC35F5Q8WV83 523 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 OSCP1Q8WVF1 389 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 FAM3CQ92520 227 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 SECISBP2LQ93073 1101 aaKnown RBP19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 FUCA2Q9BTY2 467 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 ULBP1Q9BZM6 244 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 CYLDQ9NQC7 956 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 DUS2Q9NX74 493 aaKnown RBP19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 CFAP97Q9P2B7 532 aa19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 NDRG2Q9UN36 371 aaKnown RBP19.26■□□□□ 0.67
SNRPA1-203ENST00000540017 M0QYV0 167 aa19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 MAN2B1O00754 1011 aa19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 MDM4O15151 490 aa19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 PNMA6AP0CW24 399 aaPredicted RBP19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 SETSIPP0DME0 302 aa19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 RARGP13631 454 aa19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 ZNF18P17022 549 aa19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 CTHP32929 405 aa19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 RGS7P49802 495 aa19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 TCF15Q12870 199 aa19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 PDGFRLQ15198 375 aa19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 PM20D1Q6GTS8 502 aa19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 PMF1Q6P1K2 205 aa19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 OSBPL6Q9BZF3 934 aa19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 C8orf33Q9H7E9 229 aaPredicted RBP19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 NAGPAQ9UK23 515 aa19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 F5P12259 2224 aa19.25■□□□□ 0.67
SNRPA1-203ENST00000540017 MIA3Q5JRA6 1907 aa19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 FOXN3O00409 490 aaPredicted RBP19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 GALR2O43603 387 aaPredicted RBP19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 LETM1O95202 739 aaPredicted RBP19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 ZBED1O96006 694 aa19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 USP8P40818 1118 aa19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 IFNAR2P48551 515 aa19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 KLK7P49862 253 aa19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 ADIGQ0VDE8 80 aa19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 STILQ15468 1287 aa19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 KLHDC7AQ5VTJ3 777 aa19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 DENND1BQ6P3S1 775 aa19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 APTXQ7Z2E3 356 aaKnown RBP19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 RALGPS2Q86X27 583 aaPredicted RBP19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 DTWD2Q8NBA8 298 aa19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 ZNF606Q8WXB4 792 aa19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 KCTD13Q8WZ19 329 aa19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 FAM81BQ96LP2 452 aa19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 NELL2Q99435 816 aa19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 LSM14BQ9BX40 385 aaKnown RBP19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 KLF16Q9BXK1 252 aaPredicted RBP19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 LIMA1Q9UHB6 759 aaKnown RBP19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 FHOD1Q9Y613 1164 aa19.24■□□□□ 0.67
SNRPA1-203ENST00000540017 PIK3R2O00459 728 aa19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 ATP1A3P13637 1013 aa19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 GNA15P30679 374 aa19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 CLCN1P35523 988 aa19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 ATP5C1P36542 298 aaKnown RBP19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 GPD2P43304 727 aa19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 COPB1P53618 953 aaKnown RBP19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 NAIF1Q69YI7 327 aaPredicted RBP19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 DHX40Q8IX18 779 aaKnown RBP19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 CLDN23Q96B33 292 aa19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 NAA15Q9BXJ9 866 aaKnown RBP19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 NACA2Q9H009 215 aa19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 KCNH6Q9H252 994 aa19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 ECT2Q9H8V3 914 aa19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 LRRC4Q9HBW1 653 aa19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 MRPS17Q9Y2R5 130 aaKnown RBP19.23■□□□□ 0.67
SNRPA1-203ENST00000540017 SYCE3A1L190 88 aa19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 THAP12O43422 761 aa19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 GREM1O60565 184 aa19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 IRF1P10914 325 aa19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 LCP1P13796 627 aa19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 PSEN1P49768 467 aa19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 NUBP1P53384 320 aa19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 YWHAGP61981 247 aaKnown RBP eCLIP19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 PON2Q15165 354 aa19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 C10orf120Q5SQS8 335 aa19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 DDX42Q86XP3 938 aaKnown RBP eCLIP19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 ADGRG2Q8IZP9 1017 aa19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 ZNF276Q8N554 614 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms