RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 MTHFD1LQ6UB35 978 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 C15orf39Q6ZRI6 1047 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 ACAD11Q709F0 780 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 BZW1Q7L1Q6 419 aaKnown RBP10.38□□□□□ -0.75
TRAF1-202ENST00000540010 KDM4CQ9H3R0 1056 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 KIF9Q9HAQ2 790 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 CISHQ9NSE2 258 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 ABCF3Q9NUQ8 709 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 CTNNAL1Q9UBT7 734 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 ABT1Q9ULW3 272 aaKnown RBP10.38□□□□□ -0.75
TRAF1-202ENST00000540010 NENFQ9UMX5 172 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 CNTNAP2Q9UHC6 1331 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 AIM2O14862 343 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 RIPK2O43353 540 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 XPOTO43592 962 aaKnown RBP10.38□□□□□ -0.75
TRAF1-202ENST00000540010 ITGB3P05106 788 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 MMP3P08254 477 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 GRB14Q14449 540 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 MORF4L2Q15014 288 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 ZNF572Q7Z3I7 529 aaPredicted RBP10.38□□□□□ -0.75
TRAF1-202ENST00000540010 ZNF467Q7Z7K2 595 aaPredicted RBP10.38□□□□□ -0.75
TRAF1-202ENST00000540010 MCOLN2Q8IZK6 566 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 NPLOC4Q8TAT6 608 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 PGBD4Q96DM1 585 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 PTPN18Q99952 460 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 SH3GL3Q99963 347 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 GCOM2Q9BZD3 368 aaPredicted RBP10.38□□□□□ -0.75
TRAF1-202ENST00000540010 SIK2Q9H0K1 926 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 FZD8Q9H461 694 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 GOLGA4Q13439 2230 aaKnown RBP10.38□□□□□ -0.75
TRAF1-202ENST00000540010 WDR90Q96KV7 1748 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 CTCFP49711 727 aaPredicted RBP10.38□□□□□ -0.75
TRAF1-202ENST00000540010 BTKQ06187 659 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 ITIH4Q14624 930 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 NAIF1Q69YI7 327 aaPredicted RBP10.38□□□□□ -0.75
TRAF1-202ENST00000540010 ADGRA2Q96PE1 1338 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 OTOFQ9HC10 1997 aa10.38□□□□□ -0.75
TRAF1-202ENST00000540010 MANSC4A6NHS7 340 aaPredicted RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 LACTBL1A8MY62 500 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 KPNA7A9QM74 516 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 PIAS1O75925 651 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 ASS1P00966 412 aaKnown RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 CYP2C9P11712 490 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 TMEM132DQ14C87 1099 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 FASTKD1Q53R41 847 aaKnown RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 NSL1Q96IY1 281 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 VPS39Q96JC1 886 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 MID2Q9UJV3 735 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 AGAP1Q9UPQ3 857 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 RRN3P2A6NIE6 340 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 A8MXQ7 604 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 SEC24DO94855 1032 aaPredicted RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 CYP1A2P05177 515 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 LCP1P13796 627 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 PAX7P23759 505 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 MAP2K5Q13163 448 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 CNGA3Q16281 694 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 PRPF39Q86UA1 669 aaKnown RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 TLK2Q86UE8 772 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 GALNT4Q8N4A0 578 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 UBA3Q8TBC4 463 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 ZNF606Q8WXB4 792 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 ALKBH8Q96BT7 664 aaKnown RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 KIF12Q96FN5 646 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 STXBP5LQ9Y2K9 1186 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 GOLGA8QA0A0J9YX86 632 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 GOLGA8OA6NCC3 632 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 GOLGA8NF8WBI6 632 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 GPR25O00155 361 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 DGKIO75912 1065 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 NFICP08651 508 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 MCF2P10911 925 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 RAP1GAPP47736 663 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 GEMIN4P57678 1058 aaKnown RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 CLDN10P78369 228 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 PIGHQ14442 188 aaPredicted RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 CHI3L2Q15782 390 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 RAB44Q7Z6P3 723 aaPredicted RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 C3orf20Q8ND61 904 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 TEKT4Q8WW24 435 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 LENG1Q96BZ8 264 aaPredicted RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 NAF1Q96HR8 494 aaKnown RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 GEMIN8Q9NWZ8 242 aaKnown RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 IPO11Q9UI26 975 aaKnown RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 POLIQ9UNA4 740 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 SNX9Q9Y5X1 595 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 PTPRFP10586 1907 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 ATP6V1B1P15313 513 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 ARF4P18085 180 aaPredicted RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 PMLP29590 882 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 MARCKSL1P49006 195 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 PRAMEP78395 509 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 TSTA3Q13630 321 aaPredicted RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 CRYMQ14894 314 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 RSPH3Q86UC2 560 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 TMEM192Q8IY95 271 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 IQCKQ8N0W5 287 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 ALG3Q92685 438 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 E2F7Q96AV8 911 aa10.37□□□□□ -0.75
TRAF1-202ENST00000540010 FAM49BQ9NUQ9 324 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms