RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 SPRED3Q2MJR0 410 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 TMEM95Q3KNT9 176 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 C1orf228Q6PIY5 440 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 TMC7Q7Z402 723 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 ITIH5Q86UX2 942 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 LZTR1Q8N653 840 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 TMA16Q96EY4 203 aaKnown RBP13.1□□□□□ -0.31
DDX55-206ENST00000539934 BTBD6Q96KE9 485 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 PCMTD1Q96MG8 357 aaPredicted RBP13.1□□□□□ -0.31
DDX55-206ENST00000539934 PIF1Q9H611 641 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 CYP4F11Q9HBI6 524 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 GRID1Q9ULK0 1009 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 E9PBE3 544 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 ZBTB39O15060 712 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 DHX15O43143 795 aaKnown RBP13.09□□□□□ -0.31
DDX55-206ENST00000539934 ICMTO60725 284 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 ADAM23O75077 832 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 HLA-DRAP01903 254 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 KRT6AP02538 564 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 KRT6BP04259 564 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 SPATA31D3P0C874 917 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 PBX2P40425 430 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 MAP3K7CLP57077 242 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 PDCLQ13371 301 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 CUL1Q13616 776 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 ZCWPW2Q504Y3 356 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 LRRC55Q6ZSA7 311 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 SPATA31D4Q6ZUB0 917 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 ANO5Q75V66 913 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 PATL1Q86TB9 770 aaKnown RBP13.09□□□□□ -0.31
DDX55-206ENST00000539934 SPATA24Q86W54 205 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 CYP4X1Q8N118 509 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 BBS5Q8N3I7 341 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 PTCD2Q8WV60 388 aaKnown RBP13.09□□□□□ -0.31
DDX55-206ENST00000539934 CYFIP2Q96F07 1278 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 CENPKQ9BS16 269 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 MRPL44Q9H9J2 332 aaKnown RBP13.09□□□□□ -0.31
DDX55-206ENST00000539934 SLC39A1Q9NY26 324 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 WRAP73Q9P2S5 460 aaPredicted RBP13.09□□□□□ -0.31
DDX55-206ENST00000539934 TCF20Q9UGU0 1960 aaKnown RBP13.09□□□□□ -0.31
DDX55-206ENST00000539934 MAGEA13PA6NCF6 341 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 C5orf60A6NFR6 353 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 ARHGEF15O94989 841 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 P4HBP07237 508 aaKnown RBP13.09□□□□□ -0.31
DDX55-206ENST00000539934 RETP07949 1114 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 NR3C2P08235 984 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 MTHFD1P11586 935 aaKnown RBP13.09□□□□□ -0.31
DDX55-206ENST00000539934 GAP43P17677 238 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 CALB2P22676 271 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 TMPRSS15P98073 1019 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 KDSRQ06136 332 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 MAN2A1Q16706 1144 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 VWA3BQ502W6 1294 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 MIIPQ5JXC2 388 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 XRRA1Q6P2D8 792 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 FAM122CQ6P4D5 195 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 SLC44A2Q8IWA5 706 aaPredicted RBP13.09□□□□□ -0.31
DDX55-206ENST00000539934 NSUN6Q8TEA1 469 aaKnown RBP13.09□□□□□ -0.31
DDX55-206ENST00000539934 FAM149B1Q96BN6 582 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 NECAB3Q96P71 396 aaPredicted RBP13.09□□□□□ -0.31
DDX55-206ENST00000539934 POLD4Q9HCU8 107 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 SDHAF3Q9NRP4 125 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 ABHD10Q9NUJ1 306 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 SLC12A4Q9UP95 1085 aa13.09□□□□□ -0.31
DDX55-206ENST00000539934 ARHGEF35A5YM69 484 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 TLR3O15455 904 aaKnown RBP13.08□□□□□ -0.32
DDX55-206ENST00000539934 PRMT3O60678 531 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 GCNT3O95395 438 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 SLC4A1P02730 911 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 PDHA1P08559 390 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 HOXC6P09630 235 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 RAG1P15918 1043 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 GNAZP19086 355 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 KRT6CP48668 564 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 CASP5P51878 434 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 NUBP1P53384 320 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 ZNF423Q2M1K9 1284 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 SGO2Q562F6 1265 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 BRDTQ58F21 947 aaPredicted RBP13.08□□□□□ -0.32
DDX55-206ENST00000539934 PPP4R3CPQ6ZMV5 832 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 C1orf186Q6ZWK4 172 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 BTN2A1Q7KYR7 527 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 NLRX1Q86UT6 975 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 ADNPQ9H2P0 1102 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 ZNF576Q9H609 170 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 ZSWIM4Q9H7M6 989 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 IFT22Q9H7X7 185 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 CYP39A1Q9NYL5 469 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 PTTG2Q9NZH5 202 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 TBC1D30Q9Y2I9 924 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 PPP2R2CQ9Y2T4 447 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 SOWAHDA6NJG2 315 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 SFI1A8K8P3 1242 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 SEPT4O43236 478 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 SHEQ5VZ18 495 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 VSIG10LQ86VR7 867 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 MYCT1Q8N699 235 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 FATE1Q969F0 183 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 RMDN1Q96DB5 314 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 CTRCQ99895 268 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms