RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 F8W8V4 182 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 FOXN3O00409 490 aaPredicted RBP8.02□□□□□ -1.13
CCDC60-204ENST00000539847 NFIBO00712 420 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 CCDC22O60826 627 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 EDF1O60869 148 aaKnown RBP8.02□□□□□ -1.13
CCDC60-204ENST00000539847 DNAJC6O75061 913 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 GJB5O95377 273 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 TGDSO95455 350 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 T-ENOLP0DO92 83 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 SELPP16109 830 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 TSHRP16473 764 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 RPL26P61254 145 aaKnown RBP8.02□□□□□ -1.13
CCDC60-204ENST00000539847 ERVK-21P61565 698 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 WDR5P61964 334 aaKnown RBP8.02□□□□□ -1.13
CCDC60-204ENST00000539847 CDK18Q07002 472 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 MGAT5Q09328 741 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 LEXMQ3ZCV2 418 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 DCAF17Q5H9S7 520 aaPredicted RBP8.02□□□□□ -1.13
CCDC60-204ENST00000539847 FAM47CQ5HY64 1035 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 TCERG1LQ5VWI1 586 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 OR52E8Q6IFG1 317 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 CCDC62Q6P9F0 684 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 CNKSR3Q6P9H4 555 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 DRICH1Q6PGQ1 229 aaPredicted RBP8.02□□□□□ -1.13
CCDC60-204ENST00000539847 RNF207Q6ZRF8 634 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 ZNF720Q7Z2F6 126 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 LONP2Q86WA8 852 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 FAM71AQ8IYT1 594 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 ADGRF4Q8IZF3 695 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 RNF217Q8TC41 542 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 PSPC1Q8WXF1 523 aaKnown RBP8.02□□□□□ -1.13
CCDC60-204ENST00000539847 CLEC4DQ8WXI8 215 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 PRCCQ92733 491 aaPredicted RBP8.02□□□□□ -1.13
CCDC60-204ENST00000539847 ITFG2Q969R8 447 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 RMDN2Q96LZ7 410 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 RAD9AQ99638 391 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 TIPINQ9BVW5 301 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 UBA5Q9GZZ9 404 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 MYLK2Q9H1R3 596 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 NINJ2Q9NZG7 142 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 KLK14Q9P0G3 267 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 ZNF212Q9UDV6 495 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 ANAPC5Q9UJX4 755 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 AJAP1Q9UKB5 411 aaPredicted RBP8.02□□□□□ -1.13
CCDC60-204ENST00000539847 CHKBQ9Y259 395 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 SSX2IPQ9Y2D8 614 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 STK38LQ9Y2H1 464 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 NEU2Q9Y3R4 380 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 REV3LO60673 3130 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 IGSF9BQ9UPX0 1349 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 GBF1Q92538 1859 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 NPHP3-ACAD11A0A0J9YXS1 232 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 TTC24A2A3L6 582 aaPredicted RBP8.01□□□□□ -1.13
CCDC60-204ENST00000539847 NVLO15381 856 aaKnown RBP8.01□□□□□ -1.13
CCDC60-204ENST00000539847 THAP12O43422 761 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 CSDE1O75534 798 aaKnown RBP8.01□□□□□ -1.13
CCDC60-204ENST00000539847 FAM155BO75949 473 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 PENKP01210 267 aaPredicted RBP8.01□□□□□ -1.13
CCDC60-204ENST00000539847 MYBL1P10243 752 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 TXNP10599 105 aaKnown RBP8.01□□□□□ -1.13
CCDC60-204ENST00000539847 PIM1P11309 404 aaPredicted RBP8.01□□□□□ -1.13
CCDC60-204ENST00000539847 HOXD8P13378 290 aaPredicted RBP8.01□□□□□ -1.13
CCDC60-204ENST00000539847 ATF2P15336 505 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 TIMP2P16035 220 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 IBSPP21815 317 aaPredicted RBP8.01□□□□□ -1.13
CCDC60-204ENST00000539847 FGFR4P22455 802 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 SP100P23497 879 aaPredicted RBP8.01□□□□□ -1.13
CCDC60-204ENST00000539847 FOXN2P32314 431 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 SREBF1P36956 1147 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 SLCO1A2P46721 670 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 PTDSS1P48651 473 aaKnown RBP8.01□□□□□ -1.13
CCDC60-204ENST00000539847 CASP4P49662 377 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 CASP5P51878 434 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 RPS6P62753 249 aaKnown RBP8.01□□□□□ -1.13
CCDC60-204ENST00000539847 MYL7Q01449 175 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 SLC34A1Q06495 639 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 AP1B1Q10567 949 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 LONRF1Q17RB8 773 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 ZNF394Q53GI3 561 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 SGO2Q562F6 1265 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 TMEM63BQ5T3F8 832 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 DAB2IPQ5VWQ8 1189 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 RINT1Q6NUQ1 792 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 C4orf50Q6ZRC1 276 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 C1orf186Q6ZWK4 172 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 LRRC8DQ7L1W4 858 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 TRABD2AQ86V40 505 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 KIRREL3Q8IZU9 778 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 ARHGAP24Q8N264 748 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 KIF2BQ8N4N8 673 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 ZCCHC9Q8N567 271 aaKnown RBP8.01□□□□□ -1.13
CCDC60-204ENST00000539847 PPFIBP2Q8ND30 876 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 LRRC8CQ8TDW0 803 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 LZICQ8WZA0 190 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 KRT35Q92764 455 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 GATA6Q92908 595 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 TRIM11Q96F44 468 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 SAMD11Q96NU1 681 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 IWS1Q96ST2 819 aa8.01□□□□□ -1.13
CCDC60-204ENST00000539847 HSD17B14Q9BPX1 270 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms