RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 LCP1P13796 627 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 HSPA6P17066 643 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 PLTPP55058 493 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 DENND2CQ68D51 928 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 TAX1BP1Q86VP1 789 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 EXD1Q8NHP7 514 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 RXFP2Q8WXD0 754 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 SYT15Q9BQS2 421 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 SNX24Q9Y343 169 aa17.86■□□□□ 0.45
PCDHB17P-201ENST00000539533 C2CD4BA6NLJ0 364 aa17.85■□□□□ 0.45
PCDHB17P-201ENST00000539533 CHN1P15882 459 aa17.85■□□□□ 0.45
PCDHB17P-201ENST00000539533 IL1R2P27930 398 aa17.85■□□□□ 0.45
PCDHB17P-201ENST00000539533 SLC6A3Q01959 620 aa17.85■□□□□ 0.45
PCDHB17P-201ENST00000539533 XRCC4Q13426 336 aa17.85■□□□□ 0.45
PCDHB17P-201ENST00000539533 RAB6CQ53S08 254 aa17.85■□□□□ 0.45
PCDHB17P-201ENST00000539533 NOMO2Q5JPE7 1267 aa17.85■□□□□ 0.45
PCDHB17P-201ENST00000539533 TTC27Q6P3X3 843 aa17.85■□□□□ 0.45
PCDHB17P-201ENST00000539533 ZDHHC24Q6UX98 284 aa17.85■□□□□ 0.45
PCDHB17P-201ENST00000539533 SLC39A5Q6ZMH5 540 aa17.85■□□□□ 0.45
PCDHB17P-201ENST00000539533 ZNF317Q96PQ6 595 aaPredicted RBP17.85■□□□□ 0.45
PCDHB17P-201ENST00000539533 RTP3Q9BQQ7 232 aa17.85■□□□□ 0.45
PCDHB17P-201ENST00000539533 DUSP16Q9BY84 665 aa17.85■□□□□ 0.45
PCDHB17P-201ENST00000539533 RAB6CQ9H0N0 254 aa17.85■□□□□ 0.45
PCDHB17P-201ENST00000539533 PHF2O75151 1096 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 ODC1P11926 461 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 PDGFRAP16234 1089 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 MMP13P45452 471 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 ZNF143P52747 638 aaPredicted RBP17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 DRG2P55039 364 aaKnown RBP17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 CCL23P55773 120 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 SLC25A11Q02978 314 aaKnown RBP17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 C15orf59Q2T9L4 293 aaPredicted RBP17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 SMTNL2Q2TAL5 461 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 KCNT1Q5JUK3 1230 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 LRRC38Q5VT99 294 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 DCLRE1AQ6PJP8 1040 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 PIGZQ86VD9 579 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 CCDC197Q8NCU1 140 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 FBXO25Q8TCJ0 367 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 UROC1Q96N76 676 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 MED10Q9BTT4 135 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 ZWILCHQ9H900 591 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 TBC1D13Q9NVG8 400 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 PCSK1NQ9UHG2 260 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 RASAL2Q9UJF2 1139 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 MTUS1Q9ULD2 1270 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 GPD1P21695 349 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 RPL34P49207 117 aaKnown RBP17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 RABGGTBP53611 331 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 MFSD7Q6UXD7 560 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 C1orf54Q8WWF1 131 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 ATXN2LQ8WWM7 1075 aaKnown RBP17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 RSPH1Q8WYR4 309 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 PCED1BQ96HM7 432 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 SELENOSQ9BQE4 189 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 OSBPL8Q9BZF1 889 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 ADAM7Q9H2U9 754 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 TMEM161AQ9NX61 479 aa17.84■□□□□ 0.45
PCDHB17P-201ENST00000539533 DNAJC8O75937 253 aaPredicted RBP17.83■□□□□ 0.45
PCDHB17P-201ENST00000539533 KRT1P04264 644 aa17.83■□□□□ 0.45
PCDHB17P-201ENST00000539533 DSC1Q08554 894 aa17.83■□□□□ 0.45
PCDHB17P-201ENST00000539533 FAAP100Q0VG06 881 aa17.83■□□□□ 0.45
PCDHB17P-201ENST00000539533 RCOR2Q8IZ40 523 aa17.83■□□□□ 0.45
PCDHB17P-201ENST00000539533 DIS3LQ8TF46 1054 aaKnown RBP17.83■□□□□ 0.45
PCDHB17P-201ENST00000539533 CFAP57Q96MR6 1250 aa17.83■□□□□ 0.45
PCDHB17P-201ENST00000539533 PPP1R12CQ9BZL4 782 aa17.83■□□□□ 0.45
PCDHB17P-201ENST00000539533 HIPK3Q9H422 1215 aa17.83■□□□□ 0.45
PCDHB17P-201ENST00000539533 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.83■□□□□ 0.45
PCDHB17P-201ENST00000539533 DNAJB4Q9UDY4 337 aa17.83■□□□□ 0.45
PCDHB17P-201ENST00000539533 TPX2Q9ULW0 747 aaKnown RBP17.83■□□□□ 0.45
PCDHB17P-201ENST00000539533 SCN5AQ14524 2016 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 TLDC2A0PJX2 215 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 CCT8L1PA6NM43 557 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 M0QZQ0 153 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 XPO1O14980 1071 aaKnown RBP17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 KRT10P13645 584 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 NPR3P17342 541 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 MIPP30301 263 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 CHRNA3P32297 505 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 PTGIRP43119 386 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 KCNJ1P48048 391 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 TLE2Q04725 743 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 RNASELQ05823 741 aaKnown RBP17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 ADCY2Q08462 1091 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 CYP1B1Q16678 543 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 CDO1Q16878 200 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 TRIM60Q495X7 471 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 CCDC137Q6PK04 289 aaKnown RBP17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 CLEC20AQ6ZU45 233 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 ANKRD33Q7Z3H0 272 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 NDRG1Q92597 394 aaKnown RBP17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 HSFY1Q96LI6 401 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 SLITRK1Q96PX8 696 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 CRISPLD2Q9H0B8 497 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 GRHL1Q9NZI5 618 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 CDH9Q9ULB4 789 aa17.83■□□□□ 0.44
PCDHB17P-201ENST00000539533 RGS16O15492 202 aaPredicted RBP17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 RNF8O76064 485 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 GATMP50440 423 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 MAP3K7CLP57077 242 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms