RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 FUKQ8N0W3 1084 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 EXD1Q8NHP7 514 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 HDAC7Q8WUI4 952 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 HERVK_113Q902F9 699 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 SEC14L1Q92503 715 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 KHSRPQ92945 711 aaKnown RBP eCLIP9.26□□□□□ -0.93
DDB1-213ENST00000539332 HSFY1Q96LI6 401 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 YME1L1Q96TA2 773 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 KRT12Q99456 494 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 CWH43Q9H720 699 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 GDF3Q9NR23 364 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 METTL5Q9NRN9 209 aaKnown RBP9.26□□□□□ -0.93
DDB1-213ENST00000539332 MARCH5Q9NX47 278 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 ADAM28Q9UKQ2 775 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 SUFUQ9UMX1 484 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.26□□□□□ -0.93
DDB1-213ENST00000539332 NR2E1Q9Y466 385 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 TIMM13Q9Y5L4 95 aaPredicted RBP9.26□□□□□ -0.93
DDB1-213ENST00000539332 MYO7AQ13402 2215 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 ARHGEF37A1IGU5 675 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 C2CD4BA6NLJ0 364 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 NT5C1B-RDH14C9J2C7 533 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 F8VP50 259 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 GOLGA8SH3BPF8 625 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 XPO1O14980 1071 aaKnown RBP9.25□□□□□ -0.93
DDB1-213ENST00000539332 PAPSS1O43252 624 aaPredicted RBP9.25□□□□□ -0.93
DDB1-213ENST00000539332 TRAPPC3O43617 180 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 FAM107AO95990 144 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 PDGFRBP09619 1106 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 CCDC130P13994 396 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 PTPN1P18031 435 aaKnown RBP9.25□□□□□ -0.93
DDB1-213ENST00000539332 TYMPP19971 482 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 ACADSBP45954 432 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 SNX16P57768 344 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 RNASE9P60153 205 aaKnown RBP9.25□□□□□ -0.93
DDB1-213ENST00000539332 HTRA4P83105 476 aaPredicted RBP9.25□□□□□ -0.93
DDB1-213ENST00000539332 PLCB3Q01970 1234 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 SLC25A11Q02978 314 aaKnown RBP9.25□□□□□ -0.93
DDB1-213ENST00000539332 KLF1Q13351 362 aaPredicted RBP9.25□□□□□ -0.93
DDB1-213ENST00000539332 BTG3Q14201 252 aaPredicted RBP9.25□□□□□ -0.93
DDB1-213ENST00000539332 CFAP58Q5T655 872 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 WLSQ5T9L3 541 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 DAB2IPQ5VWQ8 1189 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 TRNP1Q6NT89 227 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 SLC26A9Q7LBE3 791 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 TMEM173Q86WV6 379 aaPredicted RBP9.25□□□□□ -0.93
DDB1-213ENST00000539332 CMTR2Q8IYT2 770 aaKnown RBP9.25□□□□□ -0.93
DDB1-213ENST00000539332 ARFGAP1Q8N6T3 406 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 PRELID2Q8N945 189 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 PBXIP1Q96AQ6 731 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 PIWIL1Q96J94 861 aaKnown RBP9.25□□□□□ -0.93
DDB1-213ENST00000539332 PKMYT1Q99640 499 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 LPIN3Q9BQK8 851 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 RTP3Q9BQQ7 232 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 COLEC11Q9BWP8 271 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 AP1M1Q9BXS5 423 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 DDX47Q9H0S4 455 aaKnown RBP9.25□□□□□ -0.93
DDB1-213ENST00000539332 CRTAC1Q9NQ79 661 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 DDX43Q9NXZ2 648 aaKnown RBP9.25□□□□□ -0.93
DDB1-213ENST00000539332 PCYOX1Q9UHG3 505 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 MCM8Q9UJA3 840 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 DSEQ9UL01 958 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 CDH9Q9ULB4 789 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 NR2E3Q9Y5X4 410 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 SLC4A7Q9Y6M7 1214 aa9.25□□□□□ -0.93
DDB1-213ENST00000539332 GOLGA6L10A0A0M3HER8 536 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 GOLGA6L10A6NI86 522 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 PHF2O75151 1096 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 LRCH4O75427 683 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 GLI1P08151 1106 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 MYBL2P10244 700 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 TCF4P15884 667 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 PCSK1P29120 753 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 SLC8A1P32418 973 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 ELF1P32519 619 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 LSP1P33241 339 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 PCK1P35558 622 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 ZNF143P52747 638 aaPredicted RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 COPS2P61201 443 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 SLC6A3Q01959 620 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 FOXD4Q12950 439 aaPredicted RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 TAZQ16635 292 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 FAM102AQ5T9C2 384 aaPredicted RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 RASIP1Q5U651 963 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 KCNT2Q6UVM3 1135 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 LRIG3Q6UXM1 1119 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 HERC6Q8IVU3 1022 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 SLC2A14Q8TDB8 520 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 BCL7CQ8WUZ0 217 aaPredicted RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 MAIP1Q8WWC4 291 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 KCTD13Q8WZ19 329 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 SLC9A7Q96T83 725 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 SYT15Q9BQS2 421 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 HERPUD2Q9BSE4 406 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 ZBED2Q9BTP6 218 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 DUSP16Q9BY84 665 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 GPR62Q9BZJ7 368 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 SYNCQ9H7C4 482 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 KLC4Q9NSK0 619 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 PCDHB8Q9UN66 801 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms