RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 PHTF2Q8N3S3 785 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 CCDC33Q8N5R6 958 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 ALLCQ8N6M5 410 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 TAF4BQ92750 862 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 OTUB2Q96DC9 234 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 SMOQ99835 787 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 DUSP9Q99956 384 aaKnown RBP13.26□□□□□ -0.29
VAMP1-206ENST00000538970 CCSER2Q9H7U1 834 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 COMMD8Q9NX08 183 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 GMIPQ9P107 970 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 CHORDC1Q9UHD1 332 aaPredicted RBP13.26□□□□□ -0.29
VAMP1-206ENST00000538970 HPSEQ9Y251 543 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 FASNP49327 2511 aaKnown RBP13.26□□□□□ -0.29
VAMP1-206ENST00000538970 SPAG17Q6Q759 2223 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 A0A0A0MRY4 1105 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 A0A1B0GVL5 298 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.25□□□□□ -0.29
VAMP1-206ENST00000538970 SGK1O00141 431 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 BEST1O76090 585 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 ASS1P00966 412 aaKnown RBP13.25□□□□□ -0.29
VAMP1-206ENST00000538970 RPN1P04843 607 aaKnown RBP13.25□□□□□ -0.29
VAMP1-206ENST00000538970 APODP05090 189 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 MYL1P05976 194 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 BCKDHBP21953 392 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 GRIA2P42262 883 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 KIR2DL1P43626 348 aaPredicted RBP13.25□□□□□ -0.29
VAMP1-206ENST00000538970 ASPAP45381 313 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 NDST1P52848 882 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 KDSRQ06136 332 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 SGSM1Q2NKQ1 1148 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 HSF5Q4G112 596 aaPredicted RBP13.25□□□□□ -0.29
VAMP1-206ENST00000538970 LY6G5CQ5SRR4 150 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 C1orf220Q5T0J3 134 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 UNQ6494/PRO21346Q6UXR6 183 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 TMEM92Q6UXU6 159 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 SV2AQ7L0J3 742 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 UNC93AQ86WB7 457 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 ETFBKMTQ8IXQ9 262 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 CRYBG2Q8N1P7 616 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 IL17RCQ8NAC3 791 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 TXNDC5Q8NBS9 432 aaKnown RBP13.25□□□□□ -0.29
VAMP1-206ENST00000538970 OLIG1Q8TAK6 271 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 SLC2A14Q8TDB8 520 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 TMC2Q8TDI7 906 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 CSNK1G1Q9HCP0 422 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 ARHGEF4Q9NR80 690 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 INVSQ9Y283 1065 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 SH3BP1Q9Y3L3 701 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 ATG2BQ96BY7 2078 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 RALGAPA1Q6GYQ0 2036 aa13.25□□□□□ -0.29
VAMP1-206ENST00000538970 IKBKBO14920 756 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 HOXC11O43248 304 aaPredicted RBP13.24□□□□□ -0.29
VAMP1-206ENST00000538970 KLF8O95600 359 aaPredicted RBP13.24□□□□□ -0.29
VAMP1-206ENST00000538970 CAVIN2O95810 425 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 CMA1P23946 247 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 TIE1P35590 1138 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 PGFP49763 221 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 GAD2Q05329 585 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 CEP135Q66GS9 1140 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 RNF43Q68DV7 783 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 SPOPLQ6IQ16 392 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 BBS7Q8IWZ6 715 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 SPRYD3Q8NCJ5 442 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 WBP2Q969T9 261 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 EDEM2Q9BV94 578 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 FAM49BQ9NUQ9 324 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 USP25Q9UHP3 1055 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 TRAF3IP3Q9Y228 551 aa13.24□□□□□ -0.29
VAMP1-206ENST00000538970 LNP1A1A4G5 178 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 MAPK13O15264 365 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 CALUO43852 315 aaPredicted RBP13.23□□□□□ -0.29
VAMP1-206ENST00000538970 TLR5O60602 858 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 ADAM23O75077 832 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 ALDH1A2O94788 518 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 HLA-DRAP01903 254 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 PRR29P0C7W0 189 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 FAM200BP0CF97 657 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 IRF1P10914 325 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 SPINK2P20155 84 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 PIK3CAP42336 1068 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 TNFRSF4P43489 277 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 MAP3K7CLP57077 242 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 INCA1Q0VD86 236 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 EOGTQ5NDL2 527 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 EMC10Q5UCC4 262 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 GPRIN1Q7Z2K8 1008 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 TTC30AQ86WT1 665 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 C12orf29Q8N999 325 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 WHAMMQ8TF30 809 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 TWNKQ96RR1 684 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 LSM14BQ9BX40 385 aaKnown RBP13.23□□□□□ -0.29
VAMP1-206ENST00000538970 NACA2Q9H009 215 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 FBXO44Q9H4M3 255 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 ZDHHC4Q9NPG8 344 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 FRMD4BQ9Y2L6 1034 aa13.23□□□□□ -0.29
VAMP1-206ENST00000538970 FAM237AA0A1B0GTK4 181 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 GREM1O60565 184 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 TULP3O75386 442 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 RHOBTB3O94955 611 aa13.22□□□□□ -0.29
VAMP1-206ENST00000538970 NR2F2P24468 414 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms