RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.45□□□□□ -0.1
CD9-208ENST00000538834 GTSE1Q9NYZ3 720 aa14.45□□□□□ -0.1
CD9-208ENST00000538834 LEFTY2O00292 366 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 MAN2B1O00754 1011 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 CYP26A1O43174 497 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 CALCAP01258 141 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 CKMP06732 381 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 TARSP26639 723 aaKnown RBP14.44□□□□□ -0.1
CD9-208ENST00000538834 CTHP32929 405 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 CLCN1P35523 988 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 RPS9P46781 194 aaKnown RBP14.44□□□□□ -0.1
CD9-208ENST00000538834 MFAP3P55082 362 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 TNK2Q07912 1038 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 TCF15Q12870 199 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 RUNX3Q13761 415 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 PDGFRLQ15198 375 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 HSP90AA4PQ58FG1 418 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 KLHDC7AQ5VTJ3 777 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 CAVIN1Q6NZI2 390 aaKnown RBP14.44□□□□□ -0.1
CD9-208ENST00000538834 PMF1Q6P1K2 205 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 C1orf228Q6PIY5 440 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 TXNDC11Q6PKC3 985 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 TPRG1Q6ZUI0 275 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 RALGPS2Q86X27 583 aaPredicted RBP14.44□□□□□ -0.1
CD9-208ENST00000538834 FAM71AQ8IYT1 594 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 ADGRG2Q8IZP9 1017 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 STK32AQ8WU08 396 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 ZNF606Q8WXB4 792 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 PRRX2Q99811 253 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 FOXQ1Q9C009 403 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 TRPC7Q9HCX4 862 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 THG1LQ9NWX6 298 aaKnown RBP14.44□□□□□ -0.1
CD9-208ENST00000538834 SIK3Q9Y2K2 1263 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 SIT1Q9Y3P8 196 aa14.44□□□□□ -0.1
CD9-208ENST00000538834 A0A1W2PQH9 124 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 E2F8A0AVK6 867 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 GALR2O43603 387 aaPredicted RBP14.43□□□□□ -0.1
CD9-208ENST00000538834 TLR5O60602 858 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 CHRNB1P11230 501 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 CD72P21854 359 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 BRD2P25440 801 aaKnown RBP14.43□□□□□ -0.1
CD9-208ENST00000538834 IQCB1Q15051 598 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 ITPRIPL2Q3MIP1 535 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 ZNF852Q6ZMS4 543 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 DHX40Q8IX18 779 aaKnown RBP14.43□□□□□ -0.1
CD9-208ENST00000538834 YAF2Q8IY57 180 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 WDTC1Q8N5D0 677 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 FLCNQ8NFG4 579 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 UBA3Q8TBC4 463 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 WBP2Q969T9 261 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 HSFY1Q96LI6 401 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 GANQ9H2C0 597 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 LINC00597Q9H2U6 94 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 MFSD1Q9H3U5 465 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 ACP6Q9NPH0 428 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 DNAJC12Q9UKB3 198 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 CPQQ9Y646 472 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 PIAS3Q9Y6X2 628 aa14.43□□□□□ -0.1
CD9-208ENST00000538834 SPAG17Q6Q759 2223 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 SPECC1L-ADORA2AF8WAN1 911 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 FOXN3O00409 490 aaPredicted RBP14.42□□□□□ -0.1
CD9-208ENST00000538834 TRDMT1O14717 391 aaKnown RBP14.42□□□□□ -0.1
CD9-208ENST00000538834 TBX18O95935 607 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 ZBED1O96006 694 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 ARSAP15289 507 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 CD19P15391 556 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 MAGEA9P43362 315 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 TKTL1P51854 596 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 IFRD2Q12894 506 aaPredicted RBP14.42□□□□□ -0.1
CD9-208ENST00000538834 ANO6Q4KMQ2 910 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 TRIM68Q6AZZ1 485 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 HTR3DQ70Z44 454 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 DDX42Q86XP3 938 aaKnown RBP eCLIP14.42□□□□□ -0.1
CD9-208ENST00000538834 MAML2Q8IZL2 1156 aaPredicted RBP14.42□□□□□ -0.1
CD9-208ENST00000538834 DTWD2Q8NBA8 298 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 SLC4A5Q9BY07 1137 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 EBF3Q9H4W6 596 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 ECT2Q9H8V3 914 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 CNGB3Q9NQW8 809 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 TAB2Q9NYJ8 693 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 HESX1Q9UBX0 185 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 CYTH4Q9UIA0 394 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 PCDHGC3Q9UN70 934 aa14.42□□□□□ -0.1
CD9-208ENST00000538834 FAM170BA6NMN3 283 aa14.41□□□□□ -0.1
CD9-208ENST00000538834 LETM1O95202 739 aaPredicted RBP14.41□□□□□ -0.1
CD9-208ENST00000538834 CHRM1P11229 460 aaPredicted RBP14.41□□□□□ -0.1
CD9-208ENST00000538834 RARGP13631 454 aa14.41□□□□□ -0.1
CD9-208ENST00000538834 UCHL3P15374 230 aa14.41□□□□□ -0.1
CD9-208ENST00000538834 RFX1P22670 979 aa14.41□□□□□ -0.1
CD9-208ENST00000538834 SOX9P48436 509 aa14.41□□□□□ -0.1
CD9-208ENST00000538834 COPB1P53618 953 aaKnown RBP14.41□□□□□ -0.1
CD9-208ENST00000538834 DAOAP59103 153 aa14.41□□□□□ -0.1
CD9-208ENST00000538834 CCINQ13939 588 aa14.41□□□□□ -0.1
CD9-208ENST00000538834 TMEM196Q5HYL7 178 aa14.41□□□□□ -0.1
CD9-208ENST00000538834 Q6ZNB5 142 aa14.41□□□□□ -0.1
CD9-208ENST00000538834 TMEM110Q86TL2 294 aa14.41□□□□□ -0.1
CD9-208ENST00000538834 CREBRFQ8IUR6 639 aa14.41□□□□□ -0.1
CD9-208ENST00000538834 CSGALNACT1Q8TDX6 532 aa14.41□□□□□ -0.1
CD9-208ENST00000538834 IRGQQ8WZA9 623 aa14.41□□□□□ -0.1
CD9-208ENST00000538834 DDX1Q92499 740 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms