RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	PLA2G4A	P47712	749 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CCR3	P51677	355 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ZNF132	P52740	706 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ZXDB	P98169	803 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	TNK2	Q07912	1038 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	GOLGA8F	Q08AF8	430 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	GOLGA8DP	Q0D2H9	430 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	GRSF1	Q12849	480 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ORC1	Q13415	861 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	HTR3D	Q70Z44	454 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ADGRG2	Q8IZP9	1017 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	PPM1K	Q8N3J5	372 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ZFR	Q96KR1	1074 aa	Known RBP	12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	EBF3	Q9H4W6	596 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	SPATA6	Q9NWH7	488 aa	Predicted RBP	12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	GMIP	Q9P107	970 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ABL1	P00519	1130 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	SP9	P0CG40	484 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	RALA	P11233	206 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	GJA4	P35212	333 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	NRL	P54845	237 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	MAN2A1	Q16706	1144 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	TPD52L1	Q16890	204 aa	Predicted RBP	12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	DPCR1	Q3MIW9	517 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	PREPL	Q4J6C6	727 aa	Predicted RBP	12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	TXNDC11	Q6PKC3	985 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	TMEM270	Q6UE05	265 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	GBP6	Q6ZN66	633 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	GPRIN1	Q7Z2K8	1008 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	PIGZ	Q86VD9	579 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	TTC30A	Q86WT1	665 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	GPIHBP1	Q8IV16	184 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	MAML2	Q8IZL2	1156 aa	Predicted RBP	12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ENOX1	Q8TC92	643 aa	Known RBP	12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	HSFY1	Q96LI6	401 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	INTS2	Q9H0H0	1204 aa	Known RBP	12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	TSPAN16	Q9UKR8	245 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	NDRG2	Q9UN36	371 aa	Known RBP	12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	PCDHGA2	Q9Y5H1	932 aa		12.96	□□□□□ -0.33
CLTCL1-205	ENST00000538828	MYO16	Q9Y6X6	1858 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828		A0A0A0MRY4	1105 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CCDC163	A0A0D9SF12	145 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	OTOL1	A6NHN0	477 aa	Predicted RBP	12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CHURC1-FNTB	B4DL54	471 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ATG13	O75143	517 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ARSA	P15289	507 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	EEF1G	P26641	437 aa	Known RBP	12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	RPL34	P49207	117 aa	Known RBP	12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	MRE11	P49959	708 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	MFAP3	P55082	362 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	COG7	P83436	770 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	IFRD2	Q12894	506 aa	Predicted RBP	12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	MTAP	Q13126	283 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	EXOC3L4	Q17RC7	722 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	TRIM68	Q6AZZ1	485 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	TRIM65	Q6PJ69	517 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ZBTB44	Q8NCP5	570 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	STK32A	Q8WU08	396 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	SLC35F5	Q8WV83	523 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CHFR	Q96EP1	664 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	P2RY13	Q9BPV8	354 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	KLF16	Q9BXK1	252 aa	Predicted RBP	12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CCSER2	Q9H7U1	834 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CNGB3	Q9NQW8	809 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	OLA1	Q9NTK5	396 aa	Known RBP	12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CFAP97	Q9P2B7	532 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	APEX2	Q9UBZ4	518 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	DNMT3L	Q9UJW3	386 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ZNF510	Q9Y2H8	683 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	PCDHB4	Q9Y5E5	795 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	WNT6	Q9Y6F9	365 aa		12.95	□□□□□ -0.34
CLTCL1-205	ENST00000538828	VPS13A	Q96RL7	3174 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	COL4A3	Q01955	1670 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	LILRB5	O75023	590 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ZBED1	O96006	694 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ADH1C	P00326	375 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	RARG	P13631	454 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CD19	P15391	556 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CXCL12	P48061	93 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	SOX9	P48436	509 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	PDE4C	Q08493	712 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	LRMP	Q12912	555 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	PON2	Q15165	354 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	DHCR24	Q15392	516 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	HSF5	Q4G112	596 aa	Predicted RBP	12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	SCD5	Q86SK9	330 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	RBBP8NL	Q8NC74	664 aa	Predicted RBP	12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	GPT2	Q8TD30	523 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	IRGQ	Q8WZA9	623 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CD101	Q93033	1021 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	NKD2	Q969F2	451 aa	Predicted RBP	12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	KREMEN1	Q96MU8	473 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	DCLK3	Q9C098	648 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	NACA2	Q9H009	215 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	NMUR1	Q9HB89	426 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ZSCAN32	Q9NX65	697 aa		12.94	□□□□□ -0.34

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