RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 NCF1CA8MVU1 366 aaPredicted RBP17.35■□□□□ 0.37
SCARB1-205ENST00000538291 NFIBO00712 420 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 EIF3HO15372 352 aaKnown RBP eCLIP17.35■□□□□ 0.371e-5■□□□□ 9.1
SCARB1-205ENST00000538291 MAP3K6O95382 1288 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 NCF1P14598 390 aaPredicted RBP17.35■□□□□ 0.37
SCARB1-205ENST00000538291 HPGDP15428 266 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 WEE1P30291 646 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 RAP1GAPP47736 663 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 PMS1P54277 932 aaKnown RBP17.35■□□□□ 0.37
SCARB1-205ENST00000538291 CYP24A1Q07973 514 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 GALNT4Q8N4A0 578 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 CAMKK2Q96RR4 588 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 FICDQ9BVA6 458 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 OSBPL10Q9BXB5 764 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 ASCC2Q9H1I8 757 aaPredicted RBP17.35■□□□□ 0.37
SCARB1-205ENST00000538291 IMPAD1Q9NX62 359 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 FAM47E-STBD1D6RA91 191 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 MTA1Q13330 715 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 GRIK4Q16099 956 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 ZNF614Q8N883 585 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 CISHQ9NSE2 258 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 PLAGL2Q9UPG8 496 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 SKAP2O75563 359 aaPredicted RBP17.35■□□□□ 0.37
SCARB1-205ENST00000538291 GZMAP12544 262 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 MAPK7Q13164 816 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 TRPM8Q7Z2W7 1104 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 C11orf74Q86VG3 221 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 NSL1Q96IY1 281 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 SYT15Q9BQS2 421 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 IARS2Q9NSE4 1012 aaKnown RBP17.35■□□□□ 0.37
SCARB1-205ENST00000538291 DDX43Q9NXZ2 648 aaKnown RBP17.35■□□□□ 0.37
SCARB1-205ENST00000538291 TUBGCP4Q9UGJ1 667 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 PCDH8O95206 1070 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 JCHAINP01591 159 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 INSRRP14616 1297 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 DSG3P32926 999 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 MYL6P60660 151 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 FBXO44Q9H4M3 255 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 UTP6Q9NYH9 597 aaKnown RBP17.35■□□□□ 0.37
SCARB1-205ENST00000538291 QRICH2Q9H0J4 1663 aa17.35■□□□□ 0.37
SCARB1-205ENST00000538291 IFRD1O00458 451 aaPredicted RBP17.34■□□□□ 0.37
SCARB1-205ENST00000538291 CLK1P49759 484 aaKnown RBP17.34■□□□□ 0.37
SCARB1-205ENST00000538291 OTUD4Q01804 1114 aaKnown RBP17.34■□□□□ 0.37
SCARB1-205ENST00000538291 ALDH6A1Q02252 535 aaKnown RBP17.34■□□□□ 0.37
SCARB1-205ENST00000538291 FBXO36Q8NEA4 188 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 FAM111AQ96PZ2 611 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 NT5MQ9NPB1 228 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 COPG1Q9Y678 874 aaKnown RBP17.34■□□□□ 0.37
SCARB1-205ENST00000538291 MORC2Q9Y6X9 1032 aaPredicted RBP17.34■□□□□ 0.37
SCARB1-205ENST00000538291 PQBP1O60828 265 aaKnown RBP17.34■□□□□ 0.37
SCARB1-205ENST00000538291 GLP2RO95838 553 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 COPAP53621 1224 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 BTG3Q14201 252 aaPredicted RBP17.34■□□□□ 0.37
SCARB1-205ENST00000538291 SEC16BQ96JE7 1060 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 VPS50Q96JG6 964 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 CCDC3Q9BQI4 270 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 USE1Q9NZ43 259 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 USP18Q9UMW8 372 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 MGAT4DA6NG13 374 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 NCAM2O15394 837 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 RENBPP51606 427 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 MCL1Q07820 350 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 KAT2BQ92831 832 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 DLC1Q96QB1 1528 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 CNTNAP2Q9UHC6 1331 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 DDTLA6NHG4 134 aaPredicted RBP17.34■□□□□ 0.37
SCARB1-205ENST00000538291 SNTNA6NMZ2 147 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 TOMM70O94826 608 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 AKR1A1P14550 325 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 TAF2Q6P1X5 1199 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 TBC1D13Q9NVG8 400 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 RPS6KB2Q9UBS0 482 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 SOX13Q9UN79 622 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 NEXMIFQ5QGS0 1516 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 PLA2G6O60733 806 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 RBP1P09455 135 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 KLRC2P26717 231 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 CCR1P32246 355 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 CYP51A1Q16850 503 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 GALNTL6Q49A17 601 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 ZNF720Q7Z2F6 126 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 SLC44A2Q8IWA5 706 aaPredicted RBP17.34■□□□□ 0.37
SCARB1-205ENST00000538291 ZIM3Q96PE6 472 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 TMEM39AQ9NV64 488 aa17.34■□□□□ 0.37
SCARB1-205ENST00000538291 ZC3H13Q5T200 1668 aaKnown RBP17.33■□□□□ 0.37
SCARB1-205ENST00000538291 ALBP02768 609 aa17.33■□□□□ 0.37
SCARB1-205ENST00000538291 HOXC6P09630 235 aa17.33■□□□□ 0.37
SCARB1-205ENST00000538291 CXCL8P10145 99 aa17.33■□□□□ 0.37
SCARB1-205ENST00000538291 PWP1Q13610 501 aa17.33■□□□□ 0.37
SCARB1-205ENST00000538291 OTOAQ7RTW8 1153 aa17.33■□□□□ 0.37
SCARB1-205ENST00000538291 A0A087X0T9 212 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 POMCP01189 267 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 FAM228BP0C875 321 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 PLOD1Q02809 727 aaPredicted RBP17.33■□□□□ 0.36
SCARB1-205ENST00000538291 ITGA9Q13797 1035 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 CCDC142Q17RM4 750 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 C2CD6Q53TS8 623 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 IYDQ6PHW0 289 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 MRPL9Q9BYD2 267 aaKnown RBP17.33■□□□□ 0.36
SCARB1-205ENST00000538291 SHCBP1LQ9BZQ2 653 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms