RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 HOXA11P31270 313 aaPredicted RBP9.65□□□□□ -0.86
DDB1-211ENST00000538280 HNRNPH1P31943 449 aaKnown RBP9.65□□□□□ -0.86
DDB1-211ENST00000538280 RGS2P41220 211 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 IFNAR2P48551 515 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 ARL4CP56559 192 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 EIF3EP60228 445 aaKnown RBP9.65□□□□□ -0.86
DDB1-211ENST00000538280 DYNLT1P63172 113 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 CDC42EP1Q00587 391 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 PDIA2Q13087 525 aaKnown RBP9.65□□□□□ -0.86
DDB1-211ENST00000538280 ACVR2BQ13705 512 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 TFDP2Q14188 446 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 DPYSL3Q14195 570 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 LRRC14Q15048 493 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 PDK2Q15119 407 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 TMED2Q15363 201 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 HIF1AQ16665 826 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 GOLGA7BQ2TAP0 167 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 GALNTL6Q49A17 601 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 XKR4Q5GH76 650 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 KCNT1Q5JUK3 1230 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 FBXW10Q5XX13 1052 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 SLC9A4Q6AI14 798 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 IQSEC1Q6DN90 963 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 SLC27A1Q6PCB7 646 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 ALKAL1Q6UXT8 129 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 LIMS2Q7Z4I7 341 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 APBB1IPQ7Z5R6 666 aaPredicted RBP9.65□□□□□ -0.86
DDB1-211ENST00000538280 PLEKHH3Q7Z736 793 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 TMEM110Q86TL2 294 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 UNC93AQ86WB7 457 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 TTC30AQ86WT1 665 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 ZDHHC17Q8IUH5 632 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 ANKS4BQ8N8V4 417 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 ATP11CQ8NB49 1132 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 OR6J1Q8NGC5 347 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 UBA3Q8TBC4 463 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 MZB1Q8WU39 189 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 SLC35F5Q8WV83 523 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 NLRP7Q8WX94 980 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 PIWIL1Q96J94 861 aaKnown RBP9.65□□□□□ -0.86
DDB1-211ENST00000538280 HEXIM2Q96MH2 286 aaKnown RBP9.65□□□□□ -0.86
DDB1-211ENST00000538280 ZMAT2Q96NC0 199 aaKnown RBP9.65□□□□□ -0.86
DDB1-211ENST00000538280 RNF157Q96PX1 679 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 TSPAN18Q96SJ8 248 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 PPP1R16BQ96T49 567 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 TBCBQ99426 244 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 MRPL45Q9BRJ2 306 aaKnown RBP9.65□□□□□ -0.86
DDB1-211ENST00000538280 C11orf84Q9BUA3 381 aaPredicted RBP9.65□□□□□ -0.86
DDB1-211ENST00000538280 SENP6Q9GZR1 1112 aaPredicted RBP9.65□□□□□ -0.86
DDB1-211ENST00000538280 ABHD16BQ9H3Z7 469 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 ACSS3Q9H6R3 686 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 SYNCQ9H7C4 482 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 CYLDQ9NQC7 956 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 CNTN3Q9P232 1028 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 PSMC3IPQ9P2W1 217 aaPredicted RBP9.65□□□□□ -0.86
DDB1-211ENST00000538280 PCSK1NQ9UHG2 260 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 RABGEF1Q9UJ41 708 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 SMG5Q9UPR3 1016 aaKnown RBP9.65□□□□□ -0.86
DDB1-211ENST00000538280 RASA4BC9J798 803 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 PPEF2O14830 753 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 MCF2LO15068 1137 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 MDM4O15151 490 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 ADCY6O43306 1168 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 RASA4O43374 803 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 GABBR2O75899 941 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 FAM155BO75949 473 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 F2P00734 622 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 IFNB1P01574 187 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 RBP3P10745 1247 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 TGM2P21980 687 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 IL4RP24394 825 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 AXLP30530 894 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 STIP1P31948 543 aaKnown RBP9.64□□□□□ -0.87
DDB1-211ENST00000538280 FOXN2P32314 431 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 STX2P32856 288 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 PHBP35232 272 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 RDXP35241 583 aaKnown RBP9.64□□□□□ -0.87
DDB1-211ENST00000538280 MAGEA6P43360 314 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 PTPN9P43378 593 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 ADAM17P78536 824 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 SLC6A3Q01959 620 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 GAD2Q05329 585 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 MAP2K5Q13163 448 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 MMRN1Q13201 1228 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 KCNJ11Q14654 390 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 DGKDQ16760 1214 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 KLHL38Q2WGJ6 581 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 CCDC14Q49A88 953 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 MSS51Q4VC12 460 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 RAB6CQ53S08 254 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 BOLA3Q53S33 107 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 FNBP1LQ5T0N5 605 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 PPP1R26Q5T8A7 1209 aaPredicted RBP9.64□□□□□ -0.87
DDB1-211ENST00000538280 SH3PXD2AQ5TCZ1 1133 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 RNF43Q68DV7 783 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 OR6B2Q6IFH4 312 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 ADGRD1Q6QNK2 874 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 ARCQ7LC44 396 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 TRPM8Q7Z2W7 1104 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 SRRM1Q8IYB3 904 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms