RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 PRAMEF18Q5VWM3 479 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 AAGABQ6PD74 315 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 ALYREFQ86V81 257 aaKnown RBP12.65□□□□□ -0.38
CPSF7-218ENST00000537641 KBTBD2Q8IY47 623 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 CMASQ8NFW8 434 aaPredicted RBP12.65□□□□□ -0.38
CPSF7-218ENST00000537641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.65□□□□□ -0.38
CPSF7-218ENST00000537641 TRPM4Q8TD43 1214 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 E2F7Q96AV8 911 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 MTBPQ96DY7 904 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 ZBTB45Q96K62 511 aaPredicted RBP12.65□□□□□ -0.38
CPSF7-218ENST00000537641 GBP5Q96PP8 586 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 RSAD1Q9HA92 442 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 METTL5Q9NRN9 209 aaKnown RBP12.65□□□□□ -0.38
CPSF7-218ENST00000537641 NDE1Q9NXR1 346 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 GGA3Q9NZ52 723 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 GPRC5DQ9NZD1 345 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 SIRPGQ9P1W8 387 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 PAK5Q9P286 719 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 PPARGC1AQ9UBK2 798 aaKnown RBP12.65□□□□□ -0.38
CPSF7-218ENST00000537641 PLLPQ9Y342 182 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 AFG3L2Q9Y4W6 797 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 WASF2Q9Y6W5 498 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 PAPPA2Q9BXP8 1791 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 SPDYE16A6NNV3 312 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-218ENST00000537641 TRIM49D1C9J1S8 452 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 E5RJQ4 531 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 CSDE1O75534 798 aaKnown RBP12.64□□□□□ -0.39
CPSF7-218ENST00000537641 C1QAP02745 245 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 ENO1P06733 434 aaKnown RBP12.64□□□□□ -0.39
CPSF7-218ENST00000537641 PRKCHP24723 683 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 BST1Q10588 318 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 BIRC2Q13490 618 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 PTPN20Q4JDL3 420 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 TEX44Q53QW1 395 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 SH3D19Q5HYK7 790 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 CYP4A22Q5TCH4 519 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 ZPBP2Q6X784 338 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 RIPOR1Q6ZS17 1223 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 TREML1Q86YW5 311 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 CRLF3Q8IUI8 442 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 IGDCC3Q8IVU1 814 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 ULK2Q8IYT8 1036 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 ARFGAP1Q8N6T3 406 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 RBM15BQ8NDT2 890 aaKnown RBP12.64□□□□□ -0.39
CPSF7-218ENST00000537641 DNERQ8NFT8 737 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 JOSD2Q8TAC2 188 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 ECSITQ9BQ95 431 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 TARS2Q9BW92 718 aaKnown RBP12.64□□□□□ -0.39
CPSF7-218ENST00000537641 CCDC106Q9BWC9 280 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 ASCC2Q9H1I8 757 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-218ENST00000537641 STN1Q9H668 368 aaKnown RBP12.64□□□□□ -0.39
CPSF7-218ENST00000537641 DHX33Q9H6R0 707 aaKnown RBP12.64□□□□□ -0.39
CPSF7-218ENST00000537641 PIDD1Q9HB75 910 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 FZD1Q9UP38 647 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 SLC4A7Q9Y6M7 1214 aa12.64□□□□□ -0.39
CPSF7-218ENST00000537641 LRRIQ4A6NIV6 560 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 BIRC5O15392 142 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 ATG7O95352 703 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 LYNP07948 512 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 ICAM3P32942 547 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 RFC1P35251 1148 aaPredicted RBP12.63□□□□□ -0.39
CPSF7-218ENST00000537641 SH3BGRP55822 239 aaPredicted RBP12.63□□□□□ -0.39
CPSF7-218ENST00000537641 RPL26P61254 145 aaKnown RBP12.63□□□□□ -0.39
CPSF7-218ENST00000537641 TMPRSS15P98073 1019 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 WASHC5Q12768 1159 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 TFDP2Q14188 446 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 SMTNL2Q2TAL5 461 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 FAM47CQ5HY64 1035 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 FOXB2Q5VYV0 432 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 FAM71DQ8N9W8 422 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 KCTD6Q8NC69 237 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 CHST13Q8NET6 341 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 PPP2R3CQ969Q6 453 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 AZIN2Q96A70 460 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 LRRC39Q96DD0 335 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 PANX3Q96QZ0 392 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 SGIP1Q9BQI5 828 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 PPP1R12CQ9BZL4 782 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 C10orf88Q9H8K7 445 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 ZDHHC7Q9NXF8 308 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 ARMCX1Q9P291 453 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 SAE1Q9UBE0 346 aaPredicted RBP12.63□□□□□ -0.39
CPSF7-218ENST00000537641 OTOFQ9HC10 1997 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 SCN4AP35499 1836 aa12.63□□□□□ -0.39
CPSF7-218ENST00000537641 C2orf71A6NGG8 1288 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 SNNO75324 88 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-218ENST00000537641 PIAS1O75925 651 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 ENDOD1O94919 500 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 RTN3O95197 1032 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-218ENST00000537641 TRUB2O95900 331 aaKnown RBP12.62□□□□□ -0.39
CPSF7-218ENST00000537641 CST3P01034 146 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-218ENST00000537641 OATP04181 439 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 SERPINA6P08185 405 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 MAGEA6P43360 314 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 CPA2P48052 419 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 PSMC1P62191 440 aaKnown RBP12.62□□□□□ -0.39
CPSF7-218ENST00000537641 YWHAZP63104 245 aaKnown RBP12.62□□□□□ -0.39
CPSF7-218ENST00000537641 CNTN2Q02246 1040 aa12.62□□□□□ -0.39
CPSF7-218ENST00000537641 HNRNPDQ14103 355 aaKnown RBP12.62□□□□□ -0.39
CPSF7-218ENST00000537641 STXBP2Q15833 593 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms