RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 GMIPQ9P107 970 aa16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 PACSIN2Q9UNF0 486 aaPredicted RBP16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 C2CD4BA6NLJ0 364 aa16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 RFPL2O75678 378 aa16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 FBXO21O94952 628 aa16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 TCF4P15884 667 aa16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 HMGA1P17096 107 aaKnown RBP16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 ALDH1A3P47895 512 aa16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 SNX16P57768 344 aa16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 C15orf59Q2T9L4 293 aaPredicted RBP16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 SYPL2Q5VXT5 272 aa16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 SYT10Q6XYQ8 523 aa16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 DAAM2Q86T65 1068 aa16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 DEFB106AQ8N104 65 aa16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 MAN1C1Q9NR34 630 aa16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 CALCOCO1Q9P1Z2 691 aa16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 HSFX1Q9UBD0 423 aa16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 NAALADL1Q9UQQ1 740 aa16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 TRIOBPQ9H2D6 2365 aa16.41■□□□□ 0.22
SFSWAP-206ENST00000537582 A0A1W2PQH9 124 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 ENC1O14682 589 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 YWHAQP27348 245 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 NRIP1P48552 1158 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 YWHAZP63104 245 aaKnown RBP16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 TAF10Q12962 218 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 PLD1Q13393 1074 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 CCDC14Q49A88 953 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 ZNF697Q5TEC3 545 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 BSPRYQ5W0U4 402 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 PDE12Q6L8Q7 609 aaKnown RBP16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 ARFGAP1Q8N6T3 406 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 VN1R2Q8NFZ6 395 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 FBXO32Q969P5 355 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 LMAN2LQ9H0V9 348 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 PRDM12Q9H4Q4 367 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 ZNF334Q9HCZ1 680 aaPredicted RBP16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 DNAI1Q9UI46 699 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 NUDT5Q9UKK9 219 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 SCML2Q9UQR0 700 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 USTQ9Y2C2 406 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 HCFC2Q9Y5Z7 792 aa16.4■□□□□ 0.22
SFSWAP-206ENST00000537582 FAM92AA1XBS5 289 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 MYO1FO00160 1098 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 NRG2O14511 850 aaPredicted RBP16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 CCL16O15467 120 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 HSF2BPO75031 334 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 DAB1O75553 588 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 PROSCO94903 275 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 LTFP02788 710 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 PDGFRAP16234 1089 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 GPD1P21695 349 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 COMTP21964 271 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 PSMA2P25787 234 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 SCNN1AP37088 669 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 DNA2P51530 1060 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 YWHAGP61981 247 aaKnown RBP eCLIP16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 ETF1P62495 437 aaKnown RBP16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 ATP11AP98196 1134 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 EFHC1Q5JVL4 640 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 OTUD1Q5VV17 481 aaPredicted RBP16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 C11orf63Q6NUN7 778 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 DNAJB7Q7Z6W7 309 aaPredicted RBP16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 SLFN11Q7Z7L1 901 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 MRPL38Q96DV4 380 aaKnown RBP16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 SLC2A13Q96QE2 648 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 TLE6Q9H808 572 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 ALG6Q9Y672 507 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 REV3LO60673 3130 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 MYO16Q9Y6X6 1858 aa16.39■□□□□ 0.21
SFSWAP-206ENST00000537582 RTN3O95197 1032 aaPredicted RBP16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 TNNT1P13805 278 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 ATXN1P54253 815 aaKnown RBP16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 GRIN2CQ14957 1233 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 DUSP6Q16828 381 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 CDO1Q16878 200 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 DCAF6Q58WW2 860 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 HS6ST3Q8IZP7 471 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 SCML4Q8N228 414 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 TRIM58Q8NG06 486 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 ADAM32Q8TC27 787 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 IRGQQ8WZA9 623 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 LRCH3Q96II8 777 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 ALS2CR12Q96Q35 445 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 TTLL2Q9BWV7 592 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 FBXO44Q9H4M3 255 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 POPDC2Q9HBU9 364 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 MAFFQ9ULX9 164 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 SZT2Q5T011 3432 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 GREB1Q4ZG55 1949 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 TADA3O75528 432 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 ATP1A1P05023 1023 aaKnown RBP16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 NCAM1P13591 858 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 MATKP42679 507 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 MARCKSL1P49006 195 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 ZNF143P52747 638 aaPredicted RBP16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 EPHB3P54753 998 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 TAS2R40P59535 323 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 IFI16Q16666 785 aaKnown RBP16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 CCDC149Q6ZUS6 474 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 NT5DC3Q86UY8 548 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms