RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 RIPK3Q9Y572 518 aa7.52□□□□□ -1.21
CCDC60-203ENST00000536742 MIA3Q5JRA6 1907 aa7.52□□□□□ -1.21
CCDC60-203ENST00000536742 SHROOM3Q8TF72 1996 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 H2AFYO75367 372 aaKnown RBP7.51□□□□□ -1.21
CCDC60-203ENST00000536742 CEACAM1P13688 526 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 PHKA1P46020 1223 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 MEOX1P50221 254 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 NRG3P56975 720 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 STARD6P59095 220 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 SPIDRQ14159 915 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 SURF1Q15526 300 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.51□□□□□ -1.21
CCDC60-203ENST00000536742 KIAA1755Q5JYT7 1200 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 TMEM63BQ5T3F8 832 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 AMOTL1Q8IY63 956 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 CXorf38Q8TB03 319 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 AFG1LQ8WV93 481 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 DYDC2Q96IM9 177 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 SLC13A1Q9BZW2 595 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 MS4A5Q9H3V2 200 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 C9orf78Q9NZ63 289 aaPredicted RBP7.51□□□□□ -1.21
CCDC60-203ENST00000536742 CDH22Q9UJ99 828 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 TMX2Q9Y320 296 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 FREM2Q5SZK8 3169 aa7.51□□□□□ -1.21
CCDC60-203ENST00000536742 CFAP46Q8IYW2 2715 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 A0A1B0GTL3 188 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 CAPN9O14815 690 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 NOBOXO60393 691 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 KATNA1O75449 491 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 ZNF806P0C7X5 589 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 CSF2RBP32927 897 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 ADCY8P40145 1251 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 SCAND1P57086 179 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 CNTN2Q02246 1040 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 SIM2Q14190 667 aaPredicted RBP7.5□□□□□ -1.21
CCDC60-203ENST00000536742 TRIM71Q2Q1W2 868 aaKnown RBP7.5□□□□□ -1.21
CCDC60-203ENST00000536742 ANO4Q32M45 955 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 ZNF568Q3ZCX4 644 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 CCDC62Q6P9F0 684 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 KLHDC10Q6PID8 442 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 RALYLQ86SE5 291 aaKnown RBP7.5□□□□□ -1.21
CCDC60-203ENST00000536742 FBXO16Q8IX29 292 aaPredicted RBP7.5□□□□□ -1.21
CCDC60-203ENST00000536742 CMTR2Q8IYT2 770 aaKnown RBP7.5□□□□□ -1.21
CCDC60-203ENST00000536742 BCL6BQ8N143 479 aaPredicted RBP7.5□□□□□ -1.21
CCDC60-203ENST00000536742 MBD6Q96DN6 1003 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 ANO3Q9BYT9 981 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 ASPSCR1Q9BZE9 553 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 WDR11Q9BZH6 1224 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 TRIM8Q9BZR9 551 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 FBXO28Q9NVF7 368 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 SAP30BPQ9UHR5 308 aaKnown RBP7.5□□□□□ -1.21
CCDC60-203ENST00000536742 PRSS50Q9UI38 385 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 TMPRSS11EQ9UL52 423 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 FOCADQ5VW36 1801 aa7.5□□□□□ -1.21
CCDC60-203ENST00000536742 ITPR3Q14573 2671 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 KANSL1LA0AUZ9 987 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 MPHOSPH10O00566 681 aaKnown RBP7.49□□□□□ -1.21
CCDC60-203ENST00000536742 FSBPO95073 299 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 PCDH8O95206 1070 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 HMGB1P09429 215 aaKnown RBP7.49□□□□□ -1.21
CCDC60-203ENST00000536742 CNR2P34972 360 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 GPR3P46089 330 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 SLC5A3P53794 718 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 ATP2B3Q16720 1220 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 PITRM1Q5JRX3 1037 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 G2E3Q7L622 706 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 GLB1L2Q8IW92 636 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 ADGRG2Q8IZP9 1017 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 LGI4Q8N135 537 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 CBARPQ8N350 705 aaPredicted RBP7.49□□□□□ -1.21
CCDC60-203ENST00000536742 SLC44A3Q8N4M1 653 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 C8orf58Q8NAV2 365 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 PPP1R14CQ8TAE6 165 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 STAG1Q8WVM7 1258 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 GAB3Q8WWW8 586 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 AUTS2Q8WXX7 1259 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 WDR92Q96MX6 357 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 PRMT8Q9NR22 394 aaPredicted RBP7.49□□□□□ -1.21
CCDC60-203ENST00000536742 AATFQ9NY61 560 aaKnown RBP eCLIP7.49□□□□□ -1.21
CCDC60-203ENST00000536742 RAI14Q9P0K7 980 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 CTDP1Q9Y5B0 961 aaPredicted RBP7.49□□□□□ -1.21
CCDC60-203ENST00000536742 MRFAP1Q9Y605 127 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 ASXL3Q9C0F0 2248 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 PLXNA4Q9HCM2 1894 aa7.49□□□□□ -1.21
CCDC60-203ENST00000536742 FRMPD2Q68DX3 1309 aaPredicted RBP7.49□□□□□ -1.21
CCDC60-203ENST00000536742 GREB1Q4ZG55 1949 aa7.48□□□□□ -1.21
CCDC60-203ENST00000536742 CACNA1FO60840 1977 aa7.48□□□□□ -1.21
CCDC60-203ENST00000536742 F5H6K3 240 aa7.48□□□□□ -1.21
CCDC60-203ENST00000536742 GABRDO14764 452 aa7.48□□□□□ -1.21
CCDC60-203ENST00000536742 NCAM2O15394 837 aa7.48□□□□□ -1.21
CCDC60-203ENST00000536742 ZBED4O75132 1171 aa7.48□□□□□ -1.21
CCDC60-203ENST00000536742 SEC24DO94855 1032 aaPredicted RBP7.48□□□□□ -1.21
CCDC60-203ENST00000536742 UBR5O95071 2799 aaPredicted RBP7.48□□□□□ -1.21
CCDC60-203ENST00000536742 CELA3BP08861 270 aa7.48□□□□□ -1.21
CCDC60-203ENST00000536742 ZNF853P0CG23 659 aa7.48□□□□□ -1.21
CCDC60-203ENST00000536742 RBP3P10745 1247 aa7.48□□□□□ -1.21
CCDC60-203ENST00000536742 RDXP35241 583 aaKnown RBP7.48□□□□□ -1.21
CCDC60-203ENST00000536742 THPOP40225 353 aa7.48□□□□□ -1.21
CCDC60-203ENST00000536742 MEF2AQ02078 507 aaPredicted RBP7.48□□□□□ -1.21
CCDC60-203ENST00000536742 SF3A2Q15428 464 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms