RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 CCNIQ14094 377 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 FASTKD3Q14CZ7 662 aaKnown RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 STILQ15468 1287 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 IGSF11Q5DX21 431 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 ALKBH5Q6P6C2 394 aaKnown RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 TMC5Q6UXY8 1006 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 NPAS4Q8IUM7 802 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 FBXL16Q8N461 479 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 ICA1LQ8NDH6 482 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 LILRB4Q8NHJ6 448 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 GIPC2Q8TF65 315 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 C12orf43Q96C57 262 aaKnown RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 THAP11Q96EK4 314 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 HES6Q96HZ4 224 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 MAP6Q96JE9 813 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 CDHR1Q96JP9 859 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 WRNIP1Q96S55 665 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 MRPL9Q9BYD2 267 aaKnown RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 PRKD2Q9BZL6 878 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 TRIT1Q9H3H1 467 aaKnown RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 TOR3AQ9H497 397 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 SLITRK6Q9H5Y7 841 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 KCNK13Q9HB14 408 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 ITM2CQ9NQX7 267 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 TAS2R14Q9NYV8 317 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 FETUBQ9UGM5 382 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 HMGXB4Q9UGU5 601 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 KLHL3Q9UH77 587 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 DAPK2Q9UIK4 370 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 UGT2A1Q9Y4X1 527 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 LOC100653049A0A140TA62 436 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 ANKRD62A6NC57 917 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 A8MV72 311 aaPredicted RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 PRR5-ARHGAP8B1AHC4 643 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 BTBD19C9JJ37 291 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 LINC01387J3KSC0 135 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 TAF4O00268 1085 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 TOR1BO14657 336 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 DDX3YO15523 660 aaKnown RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 STRNO43815 780 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 GFRA3O60609 400 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 KCNJ13O60928 360 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 KRT34O76011 436 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 SERPING1P05155 500 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 PGRP06401 933 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 CCDC130P13994 396 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 ZNF182P17025 639 aaPredicted RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 CCNE1P24864 410 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 GRIA3P42263 894 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 EPS15P42566 896 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 EIF4A1P60842 406 aaKnown RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 ACTR3P61158 418 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 ARHGAP8P85298 464 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 SNAPC2Q13487 334 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 HNRNPDQ14103 355 aaKnown RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 SPIDRQ14159 915 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 RTN1Q16799 776 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 TRIM16LQ309B1 348 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 SNAP47Q5SQN1 464 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 DCLRE1AQ6PJP8 1040 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 KCNT2Q6UVM3 1135 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 ERI1Q8IV48 349 aaKnown RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 BEND7Q8N7W2 519 aaPredicted RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 GIMAP8Q8ND71 665 aaPredicted RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 ZNF398Q8TD17 642 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 KAT6AQ92794 2004 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 IL12RB2Q99665 862 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 MECRQ9BV79 373 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 MAK16Q9BXY0 300 aaKnown RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 SEZ6LQ9BYH1 1024 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 SLC6A16Q9GZN6 736 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 SEMA6AQ9H2E6 1030 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 FOXP1Q9H334 677 aaPredicted RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 ATP13A3Q9H7F0 1226 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 IFT122Q9HBG6 1241 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 RIC8AQ9NPQ8 531 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 NINJ2Q9NZG7 142 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 PPARGC1AQ9UBK2 798 aaKnown RBP3.87□□□□□ -1.79
MCF2-210ENST00000536274 ERVK-11Q9UQG0 969 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 STXBP5LQ9Y2K9 1186 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 RWDD3Q9Y3V2 267 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 DTNAQ9Y4J8 743 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 SPEF1Q9Y4P9 236 aa3.87□□□□□ -1.79
MCF2-210ENST00000536274 A0A088AWK7 358 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 PRR23AA6NEV1 266 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 TBKBP1A7MCY6 615 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CCDC188H7C350 402 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 B4GALT4O60513 344 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 SIN3BO75182 1162 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CIB2O75838 187 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 BBOX1O75936 387 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 PCNAP12004 261 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 RARGP13631 454 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 PRKCAP17252 672 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 BGNP21810 368 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ARNTP27540 789 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 HADHAP40939 763 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 RPS3AP61247 264 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 CNGA3Q16281 694 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms