RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 TTC16Q8NEE8 873 aa18.81■□□□□ 0.6
DDX55-204ENST00000536079 BPIFB1Q8TDL5 484 aa18.81■□□□□ 0.6
DDX55-204ENST00000536079 SH3RF2Q8TEC5 729 aa18.81■□□□□ 0.6
DDX55-204ENST00000536079 SLC20A1Q8WUM9 679 aa18.81■□□□□ 0.6
DDX55-204ENST00000536079 TRMT61BQ9BVS5 477 aaKnown RBP18.81■□□□□ 0.6
DDX55-204ENST00000536079 LRRC4Q9HBW1 653 aa18.81■□□□□ 0.6
DDX55-204ENST00000536079 TLR8Q9NR97 1041 aaKnown RBP18.81■□□□□ 0.6
DDX55-204ENST00000536079 GKN1Q9NS71 199 aa18.81■□□□□ 0.6
DDX55-204ENST00000536079 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.81■□□□□ 0.6
DDX55-204ENST00000536079 OBP2AQ9NY56 170 aa18.81■□□□□ 0.6
DDX55-204ENST00000536079 CA14Q9ULX7 337 aa18.81■□□□□ 0.6
DDX55-204ENST00000536079 PCDHGC3Q9UN70 934 aa18.81■□□□□ 0.6
DDX55-204ENST00000536079 ARHGAP26Q9UNA1 814 aa18.81■□□□□ 0.6
DDX55-204ENST00000536079 CPQQ9Y646 472 aa18.81■□□□□ 0.6
DDX55-204ENST00000536079 NUP210Q8TEM1 1887 aaPredicted RBP18.8■□□□□ 0.6
DDX55-204ENST00000536079 SHISA7A6NL88 538 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 YJEFN3A6XGL0 299 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 E7ENQ6 273 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 LEFTY2O00292 366 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 DPYSL4O14531 572 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 ZBED1O96006 694 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 RARGP13631 454 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 SLC8A3P57103 927 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 TNK2Q07912 1038 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 USP4Q13107 963 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 FILIP1LQ4L180 1135 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 TRIM68Q6AZZ1 485 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 DEPDC1BQ8WUY9 529 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 BAP1Q92560 729 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 SLC4A5Q9BY07 1137 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 MIS12Q9H081 205 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 IFNKQ9P0W0 207 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 ZMYM5Q9UJ78 669 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 NAGPAQ9UK23 515 aa18.8■□□□□ 0.6
DDX55-204ENST00000536079 NOCTQ9UK39 431 aaKnown RBP18.8■□□□□ 0.6
DDX55-204ENST00000536079 TLR5O60602 858 aa18.79■□□□□ 0.6
DDX55-204ENST00000536079 MMEP08473 750 aa18.79■□□□□ 0.6
DDX55-204ENST00000536079 MBL2P11226 248 aaPredicted RBP18.79■□□□□ 0.6
DDX55-204ENST00000536079 CHRNB2P17787 502 aa18.79■□□□□ 0.6
DDX55-204ENST00000536079 TUBP50607 506 aa18.79■□□□□ 0.6
DDX55-204ENST00000536079 UBASH3AP57075 661 aa18.79■□□□□ 0.6
DDX55-204ENST00000536079 DAOAP59103 153 aa18.79■□□□□ 0.6
DDX55-204ENST00000536079 YWHAGP61981 247 aaKnown RBP eCLIP18.79■□□□□ 0.6
DDX55-204ENST00000536079 TPM4P67936 248 aa18.79■□□□□ 0.6
DDX55-204ENST00000536079 GAS2L3Q86XJ1 694 aa18.79■□□□□ 0.6
DDX55-204ENST00000536079 C1orf131Q8NDD1 294 aaKnown RBP18.79■□□□□ 0.6
DDX55-204ENST00000536079 TTC8Q8TAM2 541 aa18.79■□□□□ 0.6
DDX55-204ENST00000536079 EPS8L1Q8TE68 723 aa18.79■□□□□ 0.6
DDX55-204ENST00000536079 E2F7Q96AV8 911 aa18.79■□□□□ 0.6
DDX55-204ENST00000536079 HSFY1Q96LI6 401 aa18.79■□□□□ 0.6
DDX55-204ENST00000536079 BRD9Q9H8M2 597 aa18.79■□□□□ 0.6
DDX55-204ENST00000536079 CYLDQ9NQC7 956 aa18.79■□□□□ 0.6
DDX55-204ENST00000536079 MYO16Q9Y6X6 1858 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 A0A1W2PQC6 194 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 OTOL1A6NHN0 477 aaPredicted RBP18.78■□□□□ 0.6
DDX55-204ENST00000536079 E5RJQ4 531 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 ZNF263O14978 683 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 AP5Z1O43299 807 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 ARSAP15289 507 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 PFKLP17858 780 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 PDCLQ13371 301 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 MEA1Q16626 185 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 E4F1Q66K89 784 aaPredicted RBP18.78■□□□□ 0.6
DDX55-204ENST00000536079 SMYD5Q6GMV2 418 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 SCUBE3Q8IX30 993 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 SIX5Q8N196 739 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 PIWIL1Q96J94 861 aaKnown RBP18.78■□□□□ 0.6
DDX55-204ENST00000536079 SPAG5Q96R06 1193 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 CPXM1Q96SM3 734 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 FAM83CQ9BQN1 747 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 KLF16Q9BXK1 252 aaPredicted RBP18.78■□□□□ 0.6
DDX55-204ENST00000536079 TTYH3Q9C0H2 523 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 LHX5Q9H2C1 402 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 LINC00597Q9H2U6 94 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 HPS4Q9NQG7 708 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 ST7Q9NRC1 585 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 HEBP1Q9NRV9 189 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 WNT16Q9UBV4 365 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 WNT6Q9Y6F9 365 aa18.78■□□□□ 0.6
DDX55-204ENST00000536079 CHADO15335 359 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 PAPSS1O43252 624 aaPredicted RBP18.77■□□□□ 0.6
DDX55-204ENST00000536079 FYNP06241 537 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 TCF3P15923 654 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 KRT9P35527 623 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 STAT1P42224 750 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 BPIFB4P59827 614 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 MTF1Q14872 753 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 SLC44A4Q53GD3 710 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 TMEM110Q86TL2 294 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 YAF2Q8IY57 180 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 SIX6OS1Q8N1H7 587 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 SCML4Q8N228 414 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 STK32AQ8WU08 396 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 EDEM1Q92611 657 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 PCDHB18PQ96TA0 734 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 XPO4Q9C0E2 1151 aaKnown RBP18.77■□□□□ 0.6
DDX55-204ENST00000536079 RBSNQ9H1K0 784 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 KIF9Q9HAQ2 790 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 CNGB3Q9NQW8 809 aa18.77■□□□□ 0.6
DDX55-204ENST00000536079 GTSE1Q9NYZ3 720 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms