RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 IQANK1A0A1B0GTG1 560 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 TCRBV9S1A1TA0A576 114 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 A8MUI8 341 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 NEBLO76041 1014 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 MAP3K6O95382 1288 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 MT-ND3P03897 115 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 INHBAP08476 426 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 CALRP27797 417 aaKnown RBP13.7□□□□□ -0.22
LDLR-203ENST00000535915 ZNF200P98182 395 aaPredicted RBP13.7□□□□□ -0.22
LDLR-203ENST00000535915 PDK2Q15119 407 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 KBTBD12Q3ZCT8 623 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 FYB2Q5VWT5 728 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 ACOT1Q86TX2 421 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 PLD5Q8N7P1 536 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 PPTC7Q8NI37 304 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 FAM172AQ8WUF8 416 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 C10orf82Q8WW14 230 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 NPHS2Q9NP85 383 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 FAM49BQ9NUQ9 324 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 RALGAPA2Q2PPJ7 1873 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 APOL1O14791 398 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 CHADO15335 359 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 STAU1O95793 577 aaKnown RBP13.7□□□□□ -0.22
LDLR-203ENST00000535915 TARSP26639 723 aaKnown RBP13.7□□□□□ -0.22
LDLR-203ENST00000535915 SDC4P31431 198 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 GCLCP48506 637 aaPredicted RBP13.7□□□□□ -0.22
LDLR-203ENST00000535915 BCAR1P56945 870 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 STILQ15468 1287 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 BOLA3Q53S33 107 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 NT5DC4Q86YG4 428 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 SCUBE3Q8IX30 993 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 MRPL45Q9BRJ2 306 aaKnown RBP13.7□□□□□ -0.22
LDLR-203ENST00000535915 USP29Q9HBJ7 922 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 PAK5Q9P286 719 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 SNX9Q9Y5X1 595 aa13.7□□□□□ -0.22
LDLR-203ENST00000535915 COL1A2P08123 1366 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 H3BRB1 525 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 LPXNO60711 386 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 ZBED1O96006 694 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 IL4RP24394 825 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 RBL1P28749 1068 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 ADCYAP1R1P41586 468 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 OLFML1Q6UWY5 402 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 TTC30AQ86WT1 665 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 EGFL6Q8IUX8 553 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 SHCBP1Q8NEM2 672 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 AGAP11Q8TF27 550 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 CFAP36Q96G28 342 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 C16orf70Q9BSU1 422 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 TUT1Q9H6E5 874 aaKnown RBP13.69□□□□□ -0.22
LDLR-203ENST00000535915 ALG13Q9NP73 1137 aaKnown RBP13.69□□□□□ -0.22
LDLR-203ENST00000535915 MCM8Q9UJA3 840 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 L3MBTL1Q9Y468 752 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 ATP5HO75947 161 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 ALADP13716 330 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 DESP17661 470 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 TGM2P21980 687 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 SLC6A3Q01959 620 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 PPP6R3Q5H9R7 873 aaPredicted RBP13.69□□□□□ -0.22
LDLR-203ENST00000535915 FAXCQ5TGI0 409 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 MAMDC4Q6UXC1 1216 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 TMEM237Q96Q45 408 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 RAB3IPQ96QF0 476 aaPredicted RBP13.69□□□□□ -0.22
LDLR-203ENST00000535915 CXCL16Q9H2A7 254 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 FAM124BQ9H5Z6 455 aaPredicted RBP13.69□□□□□ -0.22
LDLR-203ENST00000535915 PCDH18Q9HCL0 1135 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 HAO1Q9UJM8 370 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 GINS2Q9Y248 185 aa13.69□□□□□ -0.22
LDLR-203ENST00000535915 NPTXRO95502 500 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 TROVE2P10155 538 aaKnown RBP eCLIP13.68□□□□□ -0.22
LDLR-203ENST00000535915 ADORA2AP29274 412 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 GRM5P41594 1212 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 FAAP100Q0VG06 881 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 CA9Q16790 459 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 PQLC3Q8N755 202 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 PCDH19Q8TAB3 1148 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 LRRN4Q8WUT4 740 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 SLC44A1Q8WWI5 657 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 SNRNP25Q9BV90 132 aaKnown RBP13.68□□□□□ -0.22
LDLR-203ENST00000535915 VPS11Q9H270 941 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 MANSC1Q9H8J5 431 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 VTA1Q9NP79 307 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 HESX1Q9UBX0 185 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 MYO18AQ92614 2054 aaKnown RBP13.68□□□□□ -0.22
LDLR-203ENST00000535915 DPYSL4O14531 572 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 PPEF2O14830 753 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 SPAG6O75602 509 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 APRTP07741 180 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 OVGP1Q12889 678 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 GRIK4Q16099 956 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 ZNF276Q8N554 614 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 TEKT4Q8WW24 435 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 SERAC1Q96JX3 654 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 B3GNT5Q9BYG0 378 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 KLC2Q9H0B6 622 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 CYLDQ9NQC7 956 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 SNTG2Q9NY99 539 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 RNF181Q9P0P0 153 aa13.68□□□□□ -0.22
LDLR-203ENST00000535915 CFAP69A5D8W1 941 aa13.67□□□□□ -0.22
LDLR-203ENST00000535915 PYGBP11216 843 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms