RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 HMGXB4Q9UGU5 601 aa21.82■■□□□ 1.08
LTBR-205ENST00000535739 SH3BP1Q9Y3L3 701 aa21.82■■□□□ 1.08
LTBR-205ENST00000535739 A0A0A0MRY4 1105 aa21.81■■□□□ 1.08
LTBR-205ENST00000535739 A0A1B0GVL5 298 aa21.81■■□□□ 1.08
LTBR-205ENST00000535739 NR3C1P04150 777 aa21.81■■□□□ 1.08
LTBR-205ENST00000535739 ZDHHC11BP0C7U3 371 aa21.81■■□□□ 1.08
LTBR-205ENST00000535739 KIR2DL1P43626 348 aaPredicted RBP21.81■■□□□ 1.08
LTBR-205ENST00000535739 PGFP49763 221 aa21.81■■□□□ 1.08
LTBR-205ENST00000535739 NDST1P52848 882 aa21.81■■□□□ 1.08
LTBR-205ENST00000535739 SGSM1Q2NKQ1 1148 aa21.81■■□□□ 1.08
LTBR-205ENST00000535739 ZACNQ401N2 412 aa21.81■■□□□ 1.08
LTBR-205ENST00000535739 SPOPLQ6IQ16 392 aa21.81■■□□□ 1.08
LTBR-205ENST00000535739 BBS7Q8IWZ6 715 aa21.81■■□□□ 1.08
LTBR-205ENST00000535739 NAT16Q8N8M0 369 aa21.81■■□□□ 1.08
LTBR-205ENST00000535739 SLC2A14Q8TDB8 520 aa21.81■■□□□ 1.08
LTBR-205ENST00000535739 TMEM174Q8WUU8 243 aa21.81■■□□□ 1.08
LTBR-205ENST00000535739 EDEM2Q9BV94 578 aa21.81■■□□□ 1.08
LTBR-205ENST00000535739 LSM14BQ9BX40 385 aaKnown RBP21.81■■□□□ 1.08
LTBR-205ENST00000535739 CEP192Q8TEP8 1941 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 FAM92AA1XBS5 289 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 PDXKO00764 312 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 KRT37O76014 449 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 IRF1P10914 325 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 P4HA1P13674 534 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 PFKFB1P16118 471 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 GRIA2P42262 883 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 TUBP50607 506 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 MAP3K7CLP57077 242 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 GAD2Q05329 585 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 CEP135Q66GS9 1140 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 SV2AQ7L0J3 742 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 C11orf74Q86VG3 221 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 PHTF2Q8N3S3 785 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 C12orf29Q8N999 325 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 TMC2Q8TDI7 906 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 RLN3Q8WXF3 142 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 OTUB2Q96DC9 234 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.8■■□□□ 1.08
LTBR-205ENST00000535739 FAM49BQ9NUQ9 324 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 COMMD8Q9NX08 183 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 PLXND1Q9Y4D7 1925 aa21.8■■□□□ 1.08
LTBR-205ENST00000535739 TNRC6BQ9UPQ9 1833 aaKnown RBP21.79■■□□□ 1.08
LTBR-205ENST00000535739 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.79■■□□□ 1.08
LTBR-205ENST00000535739 ADAM23O75077 832 aa21.79■■□□□ 1.08
LTBR-205ENST00000535739 ALDH1A2O94788 518 aa21.79■■□□□ 1.08
LTBR-205ENST00000535739 RPN1P04843 607 aaKnown RBP21.79■■□□□ 1.08
LTBR-205ENST00000535739 TNFRSF4P43489 277 aa21.79■■□□□ 1.08
LTBR-205ENST00000535739 HSF5Q4G112 596 aaPredicted RBP21.79■■□□□ 1.08
LTBR-205ENST00000535739 C1orf220Q5T0J3 134 aa21.79■■□□□ 1.08
LTBR-205ENST00000535739 CRYBG2Q8N1P7 616 aa21.79■■□□□ 1.08
LTBR-205ENST00000535739 OLIG1Q8TAK6 271 aa21.79■■□□□ 1.08
LTBR-205ENST00000535739 NACA2Q9H009 215 aa21.79■■□□□ 1.08
LTBR-205ENST00000535739 CSNK1G1Q9HCP0 422 aa21.79■■□□□ 1.08
LTBR-205ENST00000535739 CIZ1Q9ULV3 898 aaPredicted RBP21.79■■□□□ 1.08
LTBR-205ENST00000535739 USP24Q9UPU5 2620 aa21.79■■□□□ 1.08
LTBR-205ENST00000535739 FRYQ5TBA9 3013 aa21.79■■□□□ 1.08
LTBR-205ENST00000535739 ASCC3Q8N3C0 2202 aaKnown RBP21.78■■□□□ 1.08
LTBR-205ENST00000535739 LNP1A1A4G5 178 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 C4orf47A7E2U8 309 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 PATE3B3GLJ2 98 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 TLR5O60602 858 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 KCNK5O95279 499 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 ASS1P00966 412 aaKnown RBP21.78■■□□□ 1.08
LTBR-205ENST00000535739 HLA-DRAP01903 254 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 CMA1P23946 247 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 PIK3CAP42336 1068 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 ASPAP45381 313 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 DHPSP49366 369 aaPredicted RBP21.78■■□□□ 1.08
LTBR-205ENST00000535739 ANO4Q32M45 955 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 EOGTQ5NDL2 527 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 BTBD8Q5XKL5 378 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 CYP2U1Q7Z449 544 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 UNC93AQ86WB7 457 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 TMEM25Q86YD3 366 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 ETFBKMTQ8IXQ9 262 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 FRMD1Q8N878 549 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 TAF4BQ92750 862 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 CHAMP1Q96JM3 812 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 POLMQ9NP87 494 aaPredicted RBP21.78■■□□□ 1.08
LTBR-205ENST00000535739 SPHK2Q9NRA0 654 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 FRMD4BQ9Y2L6 1034 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 CEP295Q9C0D2 2601 aa21.78■■□□□ 1.08
LTBR-205ENST00000535739 TBC1D3BA6NDS4 549 aa21.77■■□□□ 1.08
LTBR-205ENST00000535739 IKBKBO14920 756 aa21.77■■□□□ 1.08
LTBR-205ENST00000535739 HOXC11O43248 304 aaPredicted RBP21.77■■□□□ 1.08
LTBR-205ENST00000535739 TULP3O75386 442 aa21.77■■□□□ 1.08
LTBR-205ENST00000535739 TBX18O95935 607 aa21.77■■□□□ 1.08
LTBR-205ENST00000535739 ADORA2BP29275 332 aa21.77■■□□□ 1.08
LTBR-205ENST00000535739 PMLP29590 882 aa21.77■■□□□ 1.08
LTBR-205ENST00000535739 P2RY2P41231 377 aa21.77■■□□□ 1.08
LTBR-205ENST00000535739 GPRIN1Q7Z2K8 1008 aa21.77■■□□□ 1.08
LTBR-205ENST00000535739 WHAMMQ8TF30 809 aa21.77■■□□□ 1.08
LTBR-205ENST00000535739 HMGB4Q8WW32 186 aa21.77■■□□□ 1.08
LTBR-205ENST00000535739 TWNKQ96RR1 684 aa21.77■■□□□ 1.08
LTBR-205ENST00000535739 FBXO44Q9H4M3 255 aa21.77■■□□□ 1.08
LTBR-205ENST00000535739 TLR8Q9NR97 1041 aaKnown RBP21.77■■□□□ 1.08
LTBR-205ENST00000535739 BCCIPQ9P287 314 aaKnown RBP eCLIP21.77■■□□□ 1.08
LTBR-205ENST00000535739 USP25Q9UHP3 1055 aa21.77■■□□□ 1.08
LTBR-205ENST00000535739 HPSEQ9Y251 543 aa21.77■■□□□ 1.08
LTBR-205ENST00000535739 KHNYNO15037 678 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms