RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 PALMDQ9NP74 551 aa18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 PCDH8O95206 1070 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 KLRK1P26718 216 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 CASP4P49662 377 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 NFE2Q16621 373 aaPredicted RBP18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 CLEC17AQ6ZS10 378 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 PXMP2Q9NR77 195 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 TLR8Q9NR97 1041 aaKnown RBP18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 ADGRB3O60242 1522 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 PLA2G6O60733 806 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 SREBF1P36956 1147 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 KCNB2Q92953 911 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 ZDHHC15Q96MV8 337 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 GNG14A0A1W2PPG7 69 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 CASTOR2A6NHX0 329 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 CYP11B1P15538 503 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 PCNX4Q63HM2 1172 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 CYP4Z1Q86W10 505 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 C3orf20Q8ND61 904 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 NT5MQ9NPB1 228 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 XPO1O14980 1071 aaKnown RBP18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 GLP2RO95838 553 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 STARD3Q14849 445 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 CASP10Q92851 521 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 CYP39A1Q9NYL5 469 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 TRPM1Q7Z4N2 1603 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 IFRD1O00458 451 aaPredicted RBP18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 CPSF4O95639 269 aaKnown RBP18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 FAM131BQ86XD5 332 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 SLC20A1Q8WUM9 679 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 FAM136AQ96C01 138 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 TMEM176AQ96HP8 235 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 KANSL3Q9P2N6 904 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 PXDNLA1KZ92 1463 aa18.74■□□□□ 0.59
SFSWAP-203ENST00000535236 A0A087WZ62 844 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 KLC1Q07866 573 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 BST2Q10589 180 aaKnown RBP18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 RIN3Q8TB24 985 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 FDXACB1Q9BRP7 624 aaPredicted RBP18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 BBS2Q9BXC9 721 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 PPP2R3BQ9Y5P8 575 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 TBKBP1A7MCY6 615 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 HNRNPCP07910 306 aaKnown RBP eCLIP18.73■□□□□ 0.593e-8■□□□□ 8.6
SFSWAP-203ENST00000535236 LSP1P33241 339 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 KRT20P35900 424 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 OTUD4Q01804 1114 aaKnown RBP18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 USP39Q53GS9 565 aaKnown RBP18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 MIER2Q8N344 545 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 KIF2BQ8N4N8 673 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 SMAD5Q99717 465 aaKnown RBP18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 TBC1D23Q9NUY8 699 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 SOX13Q9UN79 622 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 GLRBP48167 497 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 C2CD6Q53TS8 623 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 MTSS1LQ765P7 747 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 SUGP1Q8IWZ8 645 aaKnown RBP18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 OSMRQ99650 979 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 CBWD1Q9BRT8 395 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 CYP3A43Q9HB55 503 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 HPS5Q9UPZ3 1129 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 TPST1O60507 370 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 ZNF286BP0CG31 522 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 HALP42357 657 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 MMP14P50281 582 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 TKTL1P51854 596 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 ATG4AQ8WYN0 398 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 THG1LQ9NWX6 298 aaKnown RBP18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 PADI4Q9UM07 663 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 CNTNAP2Q9UHC6 1331 aa18.73■□□□□ 0.59
SFSWAP-203ENST00000535236 SERPINB5P36952 375 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 DNAJC3Q13217 504 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 PLD1Q13393 1074 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 ITGA9Q13797 1035 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 TTC33Q6PID6 262 aaPredicted RBP18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 TXNRD3Q86VQ6 643 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 COL23A1Q86Y22 540 aaPredicted RBP18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 B3GALNT2Q8NCR0 500 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 TMC2Q8TDI7 906 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 CNPY3Q9BT09 278 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 NAT9Q9BTE0 207 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 POLLQ9UGP5 575 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 PNPLA6Q8IY17 1366 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 IQSEC2Q5JU85 1478 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 JCHAINP01591 159 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 TFE3P19532 575 aaPredicted RBP18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 CCND1P24385 295 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 MAPK7Q13164 816 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 GMCL1P1Q8NEA9 526 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 DNAJC9Q8WXX5 260 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 KCNF1Q9H3M0 494 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 CYP4F12Q9HCS2 524 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 USP18Q9UMW8 372 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 ARHGAP17Q68EM7 881 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 FGD2Q7Z6J4 655 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 UTP6Q9NYH9 597 aaKnown RBP18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 NFIBO00712 420 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 STRNO43815 780 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 IFNA14P01570 189 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 RBP1P09455 135 aa18.72■□□□□ 0.59
SFSWAP-203ENST00000535236 RAB27AP51159 221 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms