RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 ATXN1P54253 815 aaKnown RBP21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 PITX1P78337 314 aaPredicted RBP21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 GPR17Q13304 367 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 DDR2Q16832 855 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SDHAF4Q5VUM1 108 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SYPL2Q5VXT5 272 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 MFSD7Q6UXD7 560 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 HDAC7Q8WUI4 952 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SLITRK1Q96PX8 696 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 PNKPQ96T60 521 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 TBCBQ99426 244 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 HEMGNQ9BXL5 484 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 CRISPLD1Q9H336 500 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 ZMYND8Q9ULU4 1186 aaPredicted RBP21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 USP3Q9Y6I4 520 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 LRRD1A4D1F6 860 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 MTMR11A4FU01 709 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 GLI1P08151 1106 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 IFRD2Q12894 506 aaPredicted RBP21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SIX1Q15475 284 aaPredicted RBP21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 CLUL1Q15846 466 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 PSMD5Q16401 504 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 PM20D1Q6GTS8 502 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SCYL2Q6P3W7 929 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 VSTM1Q6UX27 236 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 RCOR2Q8IZ40 523 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 FBXO22Q8NEZ5 403 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 PIK3R5Q8WYR1 880 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 CENPIQ92674 756 aaPredicted RBP21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 RBM41Q96IZ5 413 aaKnown RBP21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SLC2A13Q96QE2 648 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 PARD6BQ9BYG5 372 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 ZMYND15Q9H091 742 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 POPDC2Q9HBU9 364 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 DDX56Q9NY93 547 aaKnown RBP21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 MTRRQ9UBK8 725 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 CCDC188H7C350 402 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 FSCN2O14926 492 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SOAT2O75908 522 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SOD2P04179 222 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 RARAP10276 462 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 HTRA4P83105 476 aaPredicted RBP21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 KIAA1841Q6NSI8 718 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 C8orf74Q6P047 294 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 PSRC1Q6PGN9 363 aaPredicted RBP21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 PRELID2Q8N945 189 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 ANKRD7Q92527 254 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 HSPH1Q92598 858 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 HINFPQ9BQA5 517 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 OSBPL8Q9BZF1 889 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 PLEKHA4Q9H4M7 779 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SPG21Q9NZD8 308 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 NAALADL1Q9UQQ1 740 aa21.25■□□□□ 0.99
TNFRSF1A-205ENST00000534885 MYO16Q9Y6X6 1858 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SART1O43290 800 aaKnown RBP21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 PRPSAP2O60256 369 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 LTFP02788 710 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 NOS2P35228 1153 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SLC7A5Q01650 507 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 KCTD19Q17RG1 926 aaPredicted RBP21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SLC25A52Q3SY17 297 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 OTUD1Q5VV17 481 aaPredicted RBP21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SLC27A5Q9Y2P5 690 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 C3orf70A6NLC5 250 aaPredicted RBP21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 LINC00271P0C7V0 271 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 KRT10P13645 584 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 DESP17661 470 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 MAGEA11P43364 429 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SULT1E1P49888 294 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 ADCY2Q08462 1091 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 ODF2Q5BJF6 829 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SLC8B1Q6J4K2 584 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SPOCD1Q6ZMY3 1216 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 ZBED2Q9BTP6 218 aa21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 OXCT2Q9BYC2 517 aaPredicted RBP21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 DMGDHQ9UI17 866 aaKnown RBP21.24■□□□□ 0.99
TNFRSF1A-205ENST00000534885 GOLGA6L10A0A0M3HER8 536 aa21.23■□□□□ 0.99
TNFRSF1A-205ENST00000534885 WDR27A2RRH5 827 aa21.23■□□□□ 0.99
TNFRSF1A-205ENST00000534885 CD48P09326 243 aa21.23■□□□□ 0.99
TNFRSF1A-205ENST00000534885 OR1D2P34982 312 aa21.23■□□□□ 0.99
TNFRSF1A-205ENST00000534885 ROR1Q01973 937 aa21.23■□□□□ 0.99
TNFRSF1A-205ENST00000534885 KLF1Q13351 362 aaPredicted RBP21.23■□□□□ 0.99
TNFRSF1A-205ENST00000534885 KAZNQ674X7 775 aa21.23■□□□□ 0.99
TNFRSF1A-205ENST00000534885 GPR152Q8TDT2 470 aa21.23■□□□□ 0.99
TNFRSF1A-205ENST00000534885 NT5C3BQ969T7 300 aa21.23■□□□□ 0.99
TNFRSF1A-205ENST00000534885 C8orf48Q96LL4 319 aa21.23■□□□□ 0.99
TNFRSF1A-205ENST00000534885 NPY6RQ99463 290 aa21.23■□□□□ 0.99
TNFRSF1A-205ENST00000534885 CAPN9O14815 690 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 TRIM66O15016 1216 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 CDKN2BP42772 138 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 DUSP4Q13115 394 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SCML4Q8N228 414 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 CMASQ8NFW8 434 aaPredicted RBP21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SPPL2BQ8TCT7 592 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 IRGQQ8WZA9 623 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 EDEM1Q92611 657 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 CLSTN3Q9BQT9 956 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 AMACRQ9UHK6 382 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 BACE2Q9Y5Z0 518 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms