RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 KCND2Q9NZV8 630 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 SUSD2Q9UGT4 822 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 SIX4Q9UIU6 781 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 ODF2LQ9ULJ1 636 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 STARD13Q9Y3M8 1113 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 NME7Q9Y5B8 376 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 SNX9Q9Y5X1 595 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 SLCO1B1Q9Y6L6 691 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 A0A1B0GTW7 788 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 PRRT4C9JH25 899 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 HOXC11O43248 304 aaPredicted RBP13.11□□□□□ -0.31
SVIP-205ENST00000533774 TRAK2O60296 914 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 NDUFS2O75306 463 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 ABL1P00519 1130 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 ZNF883P0CG24 379 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 MBL2P11226 248 aaPredicted RBP13.11□□□□□ -0.31
SVIP-205ENST00000533774 GNSP15586 552 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 GRIK1P39086 918 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 PRPHP41219 470 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 PNPLA4P41247 253 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 CLDN6P56747 220 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 TFAMQ00059 246 aaKnown RBP13.11□□□□□ -0.31
SVIP-205ENST00000533774 GAD2Q05329 585 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 TAF10Q12962 218 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 MYO1EQ12965 1108 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 HLA-BQ31612 363 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 SYCP2LQ5T4T6 812 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 DTHD1Q6ZMT9 781 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 TRMT11Q7Z4G4 463 aaKnown RBP13.11□□□□□ -0.31
SVIP-205ENST00000533774 LIMS2Q7Z4I7 341 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 GPBP1Q86WP2 473 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 BBS7Q8IWZ6 715 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 C1orf216Q8TAB5 229 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 RHBDD1Q8TEB9 315 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 GABRG3Q99928 467 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 SYT15Q9BQS2 421 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.11□□□□□ -0.31
SVIP-205ENST00000533774 DEC1Q9P2X7 70 aa13.11□□□□□ -0.31
SVIP-205ENST00000533774 MAGEC2Q9UBF1 373 aaPredicted RBP13.11□□□□□ -0.31
SVIP-205ENST00000533774 NOL7Q9UMY1 257 aaKnown RBP13.11□□□□□ -0.31
SVIP-205ENST00000533774 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.11□□□□□ -0.31
SVIP-205ENST00000533774 ARID1BQ8NFD5 2236 aaPredicted RBP13.11□□□□□ -0.31
SVIP-205ENST00000533774 PLXNA2O75051 1894 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 E2F8A0AVK6 867 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 KCNJ18B7U540 433 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 F8VP50 259 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 PLK4O00444 970 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 DHX8Q14562 1220 aaKnown RBP13.1□□□□□ -0.31
SVIP-205ENST00000533774 SMAD1Q15797 465 aaKnown RBP13.1□□□□□ -0.31
SVIP-205ENST00000533774 PTPRNQ16849 979 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 WDR45BQ5MNZ6 344 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 VSTM1Q6UX27 236 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 TOP6BLQ8N6T0 577 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 FOXJ1Q92949 421 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 TOE1Q96GM8 510 aaKnown RBP13.1□□□□□ -0.31
SVIP-205ENST00000533774 GPR174Q9BXC1 333 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 MIR1-1HGQ9H1L0 117 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 PARVGQ9HBI0 331 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 SPHK2Q9NRA0 654 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 BLOC1S4Q9NUP1 217 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 WSB2Q9NYS7 404 aaPredicted RBP13.1□□□□□ -0.31
SVIP-205ENST00000533774 TBC1D14Q9P2M4 693 aa13.1□□□□□ -0.31
SVIP-205ENST00000533774 A0A1B0GVT2 93 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 COCHO43405 550 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 FAM13AO94988 1023 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 IL18RAPO95256 599 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 PDGFRBP09619 1106 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 NCAM1P13591 858 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 PCSK1P29120 753 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 CD6P30203 668 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 EIF2S3P41091 472 aaKnown RBP13.09□□□□□ -0.31
SVIP-205ENST00000533774 MATKP42679 507 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 LHX1P48742 406 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 NOP14P78316 857 aaKnown RBP13.09□□□□□ -0.31
SVIP-205ENST00000533774 POU5F1Q01860 360 aaKnown RBP13.09□□□□□ -0.31
SVIP-205ENST00000533774 ANO4Q32M45 955 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 CCDC157Q569K6 752 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 DCAF12L1Q5VU92 463 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 DHRS13Q6UX07 377 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 KIAA1324Q6UXG2 1013 aaKnown RBP13.09□□□□□ -0.31
SVIP-205ENST00000533774 C4orf50Q6ZRC1 276 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 NT5DC4Q86YG4 428 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 CHPFQ8IZ52 775 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 GALNT15Q8N3T1 639 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 CSGALNACT2Q8N6G5 542 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 LRRC52Q8N7C0 313 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 P2RY11Q96G91 374 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 PCED1BQ96HM7 432 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 CDC6Q99741 560 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 SPTA1P02549 2419 aa13.09□□□□□ -0.31
SVIP-205ENST00000533774 COL5A1P20908 1838 aaPredicted RBP13.09□□□□□ -0.31
SVIP-205ENST00000533774 MEI4A8MW99 385 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 PYCARD-AS1I3L0S3 204 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.32
SVIP-205ENST00000533774 LAD1O00515 517 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 BCAT2O15382 392 aaPredicted RBP13.08□□□□□ -0.32
SVIP-205ENST00000533774 FLRT2O43155 660 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 GREM1O60565 184 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 CER1O95813 267 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 CYP27A1Q02318 531 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms