RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 VSNL1P62760 191 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 MDM2Q00987 491 aaPredicted RBP11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 FSCBQ5H9T9 825 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 ABHD15Q6UXT9 468 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 RASGRP2Q7LDG7 609 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 FAM172AQ8WUF8 416 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 PTPRN2Q92932 1015 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 SRPK1Q96SB4 655 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 ZFP69BQ9UJL9 534 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 TSPAN16Q9UKR8 245 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 TARSL2A2RTX5 802 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 APRTP07741 180 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 COMTP21964 271 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 ATP5C1P36542 298 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 GLUD2P49448 558 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 PMS2P54278 862 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 SOX10P56693 466 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 CORO7P57737 925 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 NAT9Q9BTE0 207 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 GOLPH3Q9H4A6 298 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 SCUBE2Q9NQ36 999 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 ZNF510Q9Y2H8 683 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 TOPAZ1Q8N9V7 1692 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 IGF2BP3O00425 579 aaKnown RBP eCLIP11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 GNGT2O14610 69 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 CFLARO15519 480 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 HAUS5O94927 633 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 CHKAP35790 457 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 CAPSQ13938 189 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 ACO2Q99798 780 aaKnown RBP11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 KDM4CQ9H3R0 1056 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 SEMA6BQ9H3T3 888 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 MRGBPQ9NV56 204 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 NDE1Q9NXR1 346 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 AIPL1Q9NZN9 384 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 SNX12Q9UMY4 172 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 ALG6Q9Y672 507 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 SHPRHQ149N8 1683 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 PEAK1Q9H792 1746 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 EIF3HO15372 352 aaKnown RBP eCLIP11.66□□□□□ -0.541e-6■■■■□ 25.8
AMBRA1-211ENST00000533727 LGR5O75473 907 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 AP2B1P63010 937 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 IL1RL1Q01638 556 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 KLC1Q07866 573 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 HECTD3Q5T447 861 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 C1orf146Q5VVC0 180 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 MRNIPQ6NTE8 343 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 ANO5Q75V66 913 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 KIAA0319LQ8IZA0 1049 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 SPPL2BQ8TCT7 592 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 USP6NLQ92738 828 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 HSFY1Q96LI6 401 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 ZCCHC2Q9C0B9 1178 aaKnown RBP11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 CDT1Q9H211 546 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 CARD9Q9H257 536 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 RNPEPQ9H4A4 650 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 LATS2Q9NRM7 1088 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 AGPAT5Q9NUQ2 364 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 AP4E1Q9UPM8 1137 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 TRIM33Q9UPN9 1127 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 C10orf71Q711Q0 1435 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 DIAPH2O60879 1101 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 NCF2P19878 526 aaPredicted RBP11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 TSHZ1Q6ZSZ6 1077 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 NUDCD3Q8IVD9 361 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 IPMKQ8NFU5 416 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 AGAP3Q96P47 875 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 DDX47Q9H0S4 455 aaKnown RBP11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 EPN3Q9H201 632 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 AFF4Q9UHB7 1163 aaKnown RBP11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 ITGALP20701 1170 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 RFC2P35250 354 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 SPRP35270 261 aaPredicted RBP11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 CASP2P42575 452 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 TMPRSS15P98073 1019 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 RAB30Q15771 203 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 SLC9A9Q8IVB4 645 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 TOP6BLQ8N6T0 577 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 TMA16Q96EY4 203 aaKnown RBP11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 PPP1R16AQ96I34 528 aa11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 UBE2OQ9C0C9 1292 aaKnown RBP11.66□□□□□ -0.54
AMBRA1-211ENST00000533727 CRTAMO95727 393 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 PTPN1P18031 435 aaKnown RBP11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 GUCY1A3Q02108 690 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 DENND5BQ6ZUT9 1274 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 SH3BP5LQ7L8J4 393 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 RASAL3Q86YV0 1011 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 IL31RAQ8NI17 732 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 SLC20A1Q8WUM9 679 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 OSCP1Q8WVF1 389 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 NIFKQ9BYG3 293 aaKnown RBP11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 FAM124BQ9H5Z6 455 aaPredicted RBP11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 MRPL40Q9NQ50 206 aaKnown RBP11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 PCDHGB4Q9UN71 923 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 TIMM13Q9Y5L4 95 aaPredicted RBP11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 IGKV6D-41A0A0C4DH26 115 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 RASA4BC9J798 803 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 RASA4O43374 803 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 RAMP2O60895 175 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 ALDH1A2O94788 518 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms