RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 KCNK16Q96T55 309 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 RBBP8Q99708 897 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 TINF2Q9BSI4 451 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 C17orf80Q9BSJ5 609 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 H2AFY2Q9P0M6 372 aaPredicted RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 RNF112Q9ULX5 631 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 NCKAP1Q9Y2A7 1128 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 A0A087X0T9 212 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 NCF1BA6NI72 391 aaPredicted RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 SDR42E2A6NKP2 422 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 PDZK1P1A8MUH7 402 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 NCF1CA8MVU1 366 aaPredicted RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 ACKR2O00590 384 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 NDUFB5O43674 189 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 PPP1R37O75864 691 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 FAM228BP0C875 321 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 NCF1P14598 390 aaPredicted RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 YWHAQP27348 245 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 RARRES1P49788 294 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 TBX4P57082 545 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 MTA1Q13330 715 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 NBPF20Q3BBV1 942 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 PREPLQ4J6C6 727 aaPredicted RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 C16orf89Q6UX73 402 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 CCNI2Q6ZMN8 369 aaPredicted RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 ZNF438Q7Z4V0 828 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 ZNF555Q8NEP9 628 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 PPP1R13LQ8WUF5 828 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 WNK4Q96J92 1243 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 PDLIM2Q96JY6 352 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 APOL2Q9BQE5 337 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 UBE2OQ9C0C9 1292 aaKnown RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 WDR41Q9HAD4 459 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 USP18Q9UMW8 372 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 F8W810 466 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 AIM2O14862 343 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 AKAP10O43572 662 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 SUPT7LO94864 414 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 MAPTP10636 758 aaKnown RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 RRM1P23921 792 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 HOXA10P31260 410 aaPredicted RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 MDH1P40925 334 aaKnown RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 TUFMP49411 452 aaKnown RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 CENPPQ6IPU0 288 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 CHMP1BQ7LBR1 199 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 LRRC6Q86X45 466 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 ZNF614Q8N883 585 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 CYP2W1Q8TAV3 490 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 KCNV2Q8TDN2 545 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 NAT9Q9BTE0 207 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 LRRC40Q9H9A6 602 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 A1CFQ9NQ94 594 aaKnown RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 DRG1Q9Y295 367 aaKnown RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 SNCAIPQ9Y6H5 919 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 MST1RQ04912 1400 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 RIMS1Q86UR5 1692 aaKnown RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 IFRD1O00458 451 aaPredicted RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 GPC1P35052 558 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 CTNNB1P35222 781 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 OTUD4Q01804 1114 aaKnown RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 SLC39A12Q504Y0 691 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 LVRNQ6Q4G3 990 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 TFAP2DQ7Z6R9 452 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 DDX42Q86XP3 938 aaKnown RBP eCLIP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ZFPM1Q8IX07 1006 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 CLEC4FQ8N1N0 589 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 EMC1Q8N766 993 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 FICDQ9BVA6 458 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 MRPL17Q9NRX2 175 aaKnown RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 RRN3Q9NYV6 651 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 EIF3LQ9Y262 564 aaKnown RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 DYRK1BQ9Y463 629 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 NFASCO94856 1347 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 TIMM44O43615 452 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 AKAP3O75969 853 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 PRIM2P49643 509 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ANXA11P50995 505 aaKnown RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 CNTN1Q12860 1018 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 NAA30Q147X3 362 aaPredicted RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 CCDC85BQ15834 202 aaPredicted RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 AASDHQ4L235 1098 aaPredicted RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 FNDC3BQ53EP0 1204 aaKnown RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 CACHD1Q5VU97 1274 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ANKS6Q68DC2 871 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ZPBP2Q6X784 338 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 MOB2Q70IA6 237 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 SETD3Q86TU7 594 aaPredicted RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 BBS7Q8IWZ6 715 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 OR2W6PQ8NHA6 318 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 SPIRE2Q8WWL2 714 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 CMTM5Q96DZ9 223 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 SMARCD1Q96GM5 515 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 FAM167BQ9BTA0 163 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ISCUQ9H1K1 167 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 ADNPQ9H2P0 1102 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 INTS13Q9NVM9 706 aa6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 UXTQ9UBK9 157 aaPredicted RBP6.59□□□□□ -1.35
UBQLN1-206ENST00000533705 RIMBP3CA6NJZ7 1639 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms