RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 GATA6Q92908 595 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 E2F7Q96AV8 911 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 CFAP36Q96G28 342 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 FAM161BQ96MY7 647 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 TRAPPC9Q96Q05 1148 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 PEBP4Q96S96 227 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 PCYT2Q99447 389 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 ZNF184Q99676 751 aaPredicted RBP17.29■□□□□ 0.36
CTSB-228ENST00000533455 TCHPQ9BT92 498 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 SDCBP2Q9H190 292 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 VPS33BQ9H267 617 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 USP29Q9HBJ7 922 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 NRBP2Q9NSY0 501 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 DDX43Q9NXZ2 648 aaKnown RBP17.29■□□□□ 0.36
CTSB-228ENST00000533455 DNAJB4Q9UDY4 337 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 TAGLN3Q9UI15 199 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 SCAF8Q9UPN6 1271 aaKnown RBP17.29■□□□□ 0.36
CTSB-228ENST00000533455 MAGEA13PA6NCF6 341 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 B4GALT4O60513 344 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 RFPL1O75677 317 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 TNNC2P02585 160 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 AMPD1P23109 780 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 TFAMQ00059 246 aaKnown RBP17.28■□□□□ 0.36
CTSB-228ENST00000533455 CNTN2Q02246 1040 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 TNFAIP1Q13829 316 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 NBPF20Q3BBV1 942 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 DNAL1Q4LDG9 190 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 CYP4V2Q6ZWL3 525 aaPredicted RBP17.28■□□□□ 0.36
CTSB-228ENST00000533455 ZC3H18Q86VM9 953 aaKnown RBP17.28■□□□□ 0.36
CTSB-228ENST00000533455 H3BRJ5 948 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 TM7SF2O76062 418 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 TMPRSS15P98073 1019 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 MMRN1Q13201 1228 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 STXBP2Q15833 593 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 MYLK4Q86YV6 388 aaPredicted RBP17.28■□□□□ 0.36
CTSB-228ENST00000533455 MFN1Q8IWA4 741 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 SCUBE1Q8IWY4 988 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 KBTBD2Q8IY47 623 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 RBM15BQ8NDT2 890 aaKnown RBP17.28■□□□□ 0.36
CTSB-228ENST00000533455 PRPF31Q8WWY3 499 aaKnown RBP17.28■□□□□ 0.36
CTSB-228ENST00000533455 MTBPQ96DY7 904 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 ANKRD36BP1Q96IX9 119 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 C12orf42Q96LP6 360 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 TEX13BQ9BXU2 312 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 PLAC1Q9HBJ0 212 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 WASF2Q9Y6W5 498 aa17.28■□□□□ 0.36
CTSB-228ENST00000533455 CXorf49A8MYA2 514 aaPredicted RBP17.27■□□□□ 0.36
CTSB-228ENST00000533455 SPECC1L-ADORA2AF8WAN1 911 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 H7C0C1 242 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 SNNO75324 88 aaPredicted RBP17.27■□□□□ 0.36
CTSB-228ENST00000533455 AVILO75366 819 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 PRKCBP05771 671 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 ENO1P06733 434 aaKnown RBP17.27■□□□□ 0.36
CTSB-228ENST00000533455 GNAT1P11488 350 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 KCNA3P22001 575 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 RAP1GAPP47736 663 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 ATP5OP48047 213 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 CPA2P48052 419 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 PAPOLAP51003 745 aaKnown RBP17.27■□□□□ 0.36
CTSB-228ENST00000533455 ZNF143P52747 638 aaPredicted RBP17.27■□□□□ 0.36
CTSB-228ENST00000533455 CDH6P55285 790 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 THEMIS2Q5TEJ8 643 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 CES4AQ5XG92 561 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 ARID3BQ8IVW6 561 aaPredicted RBP17.27■□□□□ 0.36
CTSB-228ENST00000533455 CTAGE3PQ8IX95 158 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 ZFAND2BQ8WV99 257 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 LRRC39Q96DD0 335 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 NR1H4Q96RI1 486 aaPredicted RBP17.27■□□□□ 0.36
CTSB-228ENST00000533455 MECRQ9BV79 373 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 CCDC106Q9BWC9 280 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 GPAMQ9HCL2 828 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 RAB6BQ9NRW1 208 aa17.27■□□□□ 0.36
CTSB-228ENST00000533455 PPARGC1AQ9UBK2 798 aaKnown RBP17.27■□□□□ 0.36
CTSB-228ENST00000533455 ZC3H7BQ9UGR2 993 aaKnown RBP17.27■□□□□ 0.36
CTSB-228ENST00000533455 BIRC5O15392 142 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 CIB2O75838 187 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 OSBPP22059 807 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 PROZP22891 400 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 HIRAP54198 1017 aaPredicted RBP17.26■□□□□ 0.35
CTSB-228ENST00000533455 CHI3L2Q15782 390 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 C6orf163Q5TEZ5 329 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 CWF19L1Q69YN2 538 aaKnown RBP17.26■□□□□ 0.35
CTSB-228ENST00000533455 KYAT3Q6YP21 454 aaKnown RBP17.26■□□□□ 0.35
CTSB-228ENST00000533455 NIM1KQ8IY84 436 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 GALNT15Q8N3T1 639 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 TTLL6Q8N841 843 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 ACAP3Q96P50 834 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 RNF157Q96PX1 679 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 CNPY3Q9BT09 278 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 C1orf21Q9H246 121 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 AS3MTQ9HBK9 375 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 SMYD2Q9NRG4 433 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 PAPOLBQ9NRJ5 636 aaKnown RBP17.26■□□□□ 0.35
CTSB-228ENST00000533455 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.26■□□□□ 0.35
CTSB-228ENST00000533455 NXF1Q9UBU9 619 aaKnown RBP17.26■□□□□ 0.35
CTSB-228ENST00000533455 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.26■□□□□ 0.35
CTSB-228ENST00000533455 KRT38O76015 456 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 MICAL2O94851 1124 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 APOEP02649 317 aa17.26■□□□□ 0.35
CTSB-228ENST00000533455 MYCNP04198 464 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms