RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 PCDHGB2Q9Y5G2 931 aa8.32□□□□□ -1.08
NXF1-215ENST00000533440 SNX9Q9Y5X1 595 aa8.32□□□□□ -1.08
NXF1-215ENST00000533440 TRIM66O15016 1216 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 TRIM24O15164 1050 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 FLRT2O43155 660 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 ZBTB24O43167 697 aaPredicted RBP8.31□□□□□ -1.08
NXF1-215ENST00000533440 SLC26A4O43511 780 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 CILPO75339 1184 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 CER1O95813 267 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 MBL2P11226 248 aaPredicted RBP8.31□□□□□ -1.08
NXF1-215ENST00000533440 PLCG1P19174 1290 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 LMO2P25791 158 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 ANXA13P27216 316 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 CD6P30203 668 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 PSMC1P62191 440 aaKnown RBP8.31□□□□□ -1.08
NXF1-215ENST00000533440 TAF10Q12962 218 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 POSTNQ15063 836 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 MAPRE1Q15691 268 aaKnown RBP8.31□□□□□ -1.08
NXF1-215ENST00000533440 IL27RAQ6UWB1 636 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 TMEM25Q86YD3 366 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 BRSK2Q8IWQ3 736 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 CHPFQ8IZ52 775 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 RHBDD1Q8TEB9 315 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 CACTINQ8WUQ7 758 aaKnown RBP8.31□□□□□ -1.08
NXF1-215ENST00000533440 KBTBD7Q8WVZ9 684 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 POMGNT1Q8WZA1 660 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 PCED1BQ96HM7 432 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 CDK5RAP3Q96JB5 506 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 C8orf48Q96LL4 319 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 SLC6A17Q9H1V8 727 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 IKZF4Q9H2S9 585 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 GAREM1Q9H706 876 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 SPHK2Q9NRA0 654 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 BLOC1S4Q9NUP1 217 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 WSB2Q9NYS7 404 aaPredicted RBP8.31□□□□□ -1.08
NXF1-215ENST00000533440 SIX4Q9UIU6 781 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 FNDC3AQ9Y2H6 1198 aaKnown RBP8.31□□□□□ -1.08
NXF1-215ENST00000533440 RAI2Q9Y5P3 530 aa8.31□□□□□ -1.08
NXF1-215ENST00000533440 KNTC1P50748 2209 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 CABIN1Q9Y6J0 2220 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 PTPRQQ9UMZ3 2332 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 F8VP50 259 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 GFRA2O00451 464 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 RIOK3O14730 519 aaKnown RBP8.3□□□□□ -1.08
NXF1-215ENST00000533440 COCHO43405 550 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 PPP1R37O75864 691 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 ABL1P00519 1130 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 NCAM1P13591 858 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 ITPKBP27987 946 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 MATKP42679 507 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 NEK4P51957 841 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 HMGN5P82970 282 aaKnown RBP8.3□□□□□ -1.08
NXF1-215ENST00000533440 RBP5P82980 135 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 CYP27A1Q02318 531 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 PTPRNQ16849 979 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 HLA-BQ31612 363 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 SNX30Q5VWJ9 437 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 TDRD10Q5VZ19 366 aaKnown RBP8.3□□□□□ -1.08
NXF1-215ENST00000533440 GRAMD4Q6IC98 578 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 SDE2Q6IQ49 451 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 ZNF720Q7Z2F6 126 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 ZNF605Q86T29 641 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 CCDC83Q8IWF9 413 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 BBS7Q8IWZ6 715 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 ZNF843Q8N446 348 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 ZCCHC9Q8N567 271 aaKnown RBP8.3□□□□□ -1.08
NXF1-215ENST00000533440 CSGALNACT2Q8N6G5 542 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 SPRYD3Q8NCJ5 442 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 ZSWIM2Q8NEG5 633 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 CADM4Q8NFZ8 388 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 C1orf216Q8TAB5 229 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 PIP4K2CQ8TBX8 421 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 MYCBPAPQ8TBZ2 947 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 OVCA2Q8WZ82 227 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 HVCN1Q96D96 273 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 TOE1Q96GM8 510 aaKnown RBP8.3□□□□□ -1.08
NXF1-215ENST00000533440 FAM84AQ96KN4 292 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 SLITRK1Q96PX8 696 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 KIF2CQ99661 725 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 STRA6Q9BX79 667 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 PRDM16Q9HAZ2 1276 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 ITM2CQ9NQX7 267 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 TMEM30AQ9NV96 361 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 USP36Q9P275 1121 aaKnown RBP8.3□□□□□ -1.08
NXF1-215ENST00000533440 BTBD3Q9Y2F9 522 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 RAD54BQ9Y620 910 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 KNL1Q8NG31 2342 aa8.3□□□□□ -1.08
NXF1-215ENST00000533440 FAM149AA5PLN7 773 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 VWA3AA6NCI4 1184 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 MEI4A8MW99 385 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 PRRT4C9JH25 899 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 BCAT2O15382 392 aaPredicted RBP8.29□□□□□ -1.08
NXF1-215ENST00000533440 TNFSF14O43557 240 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 CACNG3O60359 315 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 TBCAO75347 108 aaKnown RBP8.29□□□□□ -1.08
NXF1-215ENST00000533440 LDHAP00338 332 aaKnown RBP8.29□□□□□ -1.08
NXF1-215ENST00000533440 KRT19P08727 400 aa8.29□□□□□ -1.08
NXF1-215ENST00000533440 WARSP23381 471 aaKnown RBP8.29□□□□□ -1.08
NXF1-215ENST00000533440 EIF2S3P41091 472 aaKnown RBP8.29□□□□□ -1.08
NXF1-215ENST00000533440 CACNA2D1P54289 1103 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms